G-MAPSEQ – a new method for mapping reads to a reference genome

The problem of reads mapping to a reference genome is one of the most essential problems in modern computational biology. The most popular algorithms used to solve this problem are based on the Burrows-Wheeler transform and the FM-index. However, this causes some issues with highly mutated sequences...

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Bibliographic Details
Main Authors: Wojciechowski Pawel, Frohmberg Wojciech, Kierzynka Michal, Zurkowski Piotr, Blazewicz Jacek
Format: Article
Language:English
Published: Sciendo 2016-06-01
Series:Foundations of Computing and Decision Sciences
Subjects:
Online Access:https://doi.org/10.1515/fcds-2016-0007