IMPARO: inferring microbial interactions through parameter optimisation

IMPARO: inferring microbial interactions through parameter optimisation

Abstract Background Microbial Interaction Networks (MINs) provide important information for understanding bacterial communities. MINs can be inferred by examining microbial abundance profiles. Abundance profiles are often interpreted with the Lotka Volterra model in research. However existing resear...

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Bibliographic Details
Main Authors: Rajith Vidanaarachchi, Marnie Shaw, Sen-Lin Tang, Saman Halgamuge
Format: Article
Language:English
Published: BMC 2020-08-01
Series:BMC Molecular and Cell Biology
Subjects:
Metagenomics
Inferring interactions
Network dynamics
Microbial interaction network
Online Access:http://link.springer.com/article/10.1186/s12860-020-00269-y

Internet

http://link.springer.com/article/10.1186/s12860-020-00269-y

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