SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation.

FASTA and FASTQ are basic and ubiquitous formats for storing nucleotide and protein sequences. Common manipulations of FASTA/Q file include converting, searching, filtering, deduplication, splitting, shuffling, and sampling. Existing tools only implement some of these manipulations, and not particul...

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Bibliographic Details
Main Authors: Wei Shen, Shuai Le, Yan Li, Fuquan Hu
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2016-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5051824?pdf=render