A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II.
During the acquisition of memories, influx of Ca2+ into the postsynaptic spine through the pores of activated N-methyl-D-aspartate-type glutamate receptors triggers processes that change the strength of excitatory synapses. The pattern of Ca2+influx during the first few seconds of activity is interp...
Main Authors: | , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2010-02-01
|
Series: | PLoS Computational Biology |
Online Access: | http://europepmc.org/articles/PMC2820514?pdf=render |
id |
doaj-142f70e1a8114a3ba5480a44c70d8c7e |
---|---|
record_format |
Article |
spelling |
doaj-142f70e1a8114a3ba5480a44c70d8c7e2020-11-24T21:49:06ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582010-02-0162e100067510.1371/journal.pcbi.1000675A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II.Shirley PepkeTamara Kinzer-UrsemStefan MihalasMary B KennedyDuring the acquisition of memories, influx of Ca2+ into the postsynaptic spine through the pores of activated N-methyl-D-aspartate-type glutamate receptors triggers processes that change the strength of excitatory synapses. The pattern of Ca2+influx during the first few seconds of activity is interpreted within the Ca2+-dependent signaling network such that synaptic strength is eventually either potentiated or depressed. Many of the critical signaling enzymes that control synaptic plasticity,including Ca2+/calmodulin-dependent protein kinase II (CaMKII), are regulated by calmodulin, a small protein that can bindup to 4 Ca2+ ions. As a first step toward clarifying how the Ca2+-signaling network decides between potentiation or depression, we have created a kinetic model of the interactions of Ca2+, calmodulin, and CaMKII that represents our best understanding of the dynamics of these interactions under conditions that resemble those in a postsynaptic spine. We constrained parameters of the model from data in the literature, or from our own measurements, and then predicted time courses of activation and autophosphorylation of CaMKII under a variety of conditions. Simulations showed that species of calmodulin with fewer than four bound Ca2+ play a significant role in activation of CaMKII in the physiological regime,supporting the notion that processing of Ca2+ signals in a spine involves competition among target enzymes for binding to unsaturated species of CaM in an environment in which the concentration of Ca2+ is fluctuating rapidly. Indeed, we showed that dependence of activation on the frequency of Ca2+ transients arises from the kinetics of interaction of fluctuating Ca2+with calmodulin/CaMKII complexes. We used parameter sensitivity analysis to identify which parameters will be most beneficial to measure more carefully to improve the accuracy of predictions. This model provides a quantitative base from which to build more complex dynamic models of postsynaptic signal transduction during learning.http://europepmc.org/articles/PMC2820514?pdf=render |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Shirley Pepke Tamara Kinzer-Ursem Stefan Mihalas Mary B Kennedy |
spellingShingle |
Shirley Pepke Tamara Kinzer-Ursem Stefan Mihalas Mary B Kennedy A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II. PLoS Computational Biology |
author_facet |
Shirley Pepke Tamara Kinzer-Ursem Stefan Mihalas Mary B Kennedy |
author_sort |
Shirley Pepke |
title |
A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II. |
title_short |
A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II. |
title_full |
A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II. |
title_fullStr |
A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II. |
title_full_unstemmed |
A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II. |
title_sort |
dynamic model of interactions of ca2+, calmodulin, and catalytic subunits of ca2+/calmodulin-dependent protein kinase ii. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS Computational Biology |
issn |
1553-734X 1553-7358 |
publishDate |
2010-02-01 |
description |
During the acquisition of memories, influx of Ca2+ into the postsynaptic spine through the pores of activated N-methyl-D-aspartate-type glutamate receptors triggers processes that change the strength of excitatory synapses. The pattern of Ca2+influx during the first few seconds of activity is interpreted within the Ca2+-dependent signaling network such that synaptic strength is eventually either potentiated or depressed. Many of the critical signaling enzymes that control synaptic plasticity,including Ca2+/calmodulin-dependent protein kinase II (CaMKII), are regulated by calmodulin, a small protein that can bindup to 4 Ca2+ ions. As a first step toward clarifying how the Ca2+-signaling network decides between potentiation or depression, we have created a kinetic model of the interactions of Ca2+, calmodulin, and CaMKII that represents our best understanding of the dynamics of these interactions under conditions that resemble those in a postsynaptic spine. We constrained parameters of the model from data in the literature, or from our own measurements, and then predicted time courses of activation and autophosphorylation of CaMKII under a variety of conditions. Simulations showed that species of calmodulin with fewer than four bound Ca2+ play a significant role in activation of CaMKII in the physiological regime,supporting the notion that processing of Ca2+ signals in a spine involves competition among target enzymes for binding to unsaturated species of CaM in an environment in which the concentration of Ca2+ is fluctuating rapidly. Indeed, we showed that dependence of activation on the frequency of Ca2+ transients arises from the kinetics of interaction of fluctuating Ca2+with calmodulin/CaMKII complexes. We used parameter sensitivity analysis to identify which parameters will be most beneficial to measure more carefully to improve the accuracy of predictions. This model provides a quantitative base from which to build more complex dynamic models of postsynaptic signal transduction during learning. |
url |
http://europepmc.org/articles/PMC2820514?pdf=render |
work_keys_str_mv |
AT shirleypepke adynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii AT tamarakinzerursem adynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii AT stefanmihalas adynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii AT marybkennedy adynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii AT shirleypepke dynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii AT tamarakinzerursem dynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii AT stefanmihalas dynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii AT marybkennedy dynamicmodelofinteractionsofca2calmodulinandcatalyticsubunitsofca2calmodulindependentproteinkinaseii |
_version_ |
1725889586429689856 |