Fast and accurate protein substructure searching with simulated annealing and GPUs

<p>Abstract</p> <p>Background</p> <p>Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioinformatics. While there are many existing methods for structural si...

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Bibliographic Details
Main Authors: Stivala Alex D, Stuckey Peter J, Wirth Anthony I
Format: Article
Language:English
Published: BMC 2010-09-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/11/446