Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles

Single-cell genomics can be used to study uncultured microorganisms. Here, Stepanauskas et al. present a method combining improved multiple displacement amplification and FACS, to obtain genomic sequences and cell size information from uncultivated microbial cells and viral particles in environmenta...

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Main Authors: Ramunas Stepanauskas, Elizabeth A. Fergusson, Joseph Brown, Nicole J. Poulton, Ben Tupper, Jessica M. Labonté, Eric D. Becraft, Julia M. Brown, Maria G. Pachiadaki, Tadas Povilaitis, Brian P. Thompson, Corianna J. Mascena, Wendy K. Bellows, Arvydas Lubys
Format: Article
Language:English
Published: Nature Publishing Group 2017-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-017-00128-z
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spelling doaj-1103091ab4b04fd8bf75b654668bcb212021-01-31T12:40:20ZengNature Publishing GroupNature Communications2041-17232017-07-018111010.1038/s41467-017-00128-zImproved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particlesRamunas Stepanauskas0Elizabeth A. Fergusson1Joseph Brown2Nicole J. Poulton3Ben Tupper4Jessica M. Labonté5Eric D. Becraft6Julia M. Brown7Maria G. Pachiadaki8Tadas Povilaitis9Brian P. Thompson10Corianna J. Mascena11Wendy K. Bellows12Arvydas Lubys13Bigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesThermo Fisher Scientific BalticsBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesBigelow Laboratory for Ocean SciencesThermo Fisher Scientific BalticsSingle-cell genomics can be used to study uncultured microorganisms. Here, Stepanauskas et al. present a method combining improved multiple displacement amplification and FACS, to obtain genomic sequences and cell size information from uncultivated microbial cells and viral particles in environmental samples.https://doi.org/10.1038/s41467-017-00128-z
collection DOAJ
language English
format Article
sources DOAJ
author Ramunas Stepanauskas
Elizabeth A. Fergusson
Joseph Brown
Nicole J. Poulton
Ben Tupper
Jessica M. Labonté
Eric D. Becraft
Julia M. Brown
Maria G. Pachiadaki
Tadas Povilaitis
Brian P. Thompson
Corianna J. Mascena
Wendy K. Bellows
Arvydas Lubys
spellingShingle Ramunas Stepanauskas
Elizabeth A. Fergusson
Joseph Brown
Nicole J. Poulton
Ben Tupper
Jessica M. Labonté
Eric D. Becraft
Julia M. Brown
Maria G. Pachiadaki
Tadas Povilaitis
Brian P. Thompson
Corianna J. Mascena
Wendy K. Bellows
Arvydas Lubys
Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
Nature Communications
author_facet Ramunas Stepanauskas
Elizabeth A. Fergusson
Joseph Brown
Nicole J. Poulton
Ben Tupper
Jessica M. Labonté
Eric D. Becraft
Julia M. Brown
Maria G. Pachiadaki
Tadas Povilaitis
Brian P. Thompson
Corianna J. Mascena
Wendy K. Bellows
Arvydas Lubys
author_sort Ramunas Stepanauskas
title Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
title_short Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
title_full Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
title_fullStr Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
title_full_unstemmed Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
title_sort improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
publisher Nature Publishing Group
series Nature Communications
issn 2041-1723
publishDate 2017-07-01
description Single-cell genomics can be used to study uncultured microorganisms. Here, Stepanauskas et al. present a method combining improved multiple displacement amplification and FACS, to obtain genomic sequences and cell size information from uncultivated microbial cells and viral particles in environmental samples.
url https://doi.org/10.1038/s41467-017-00128-z
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