Recovery of complete genomes and non-chromosomal replicons from activated sludge enrichment microbial communities with long read metagenome sequencing

Recovery of complete genomes and non-chromosomal replicons from activated sludge enrichment microbial communities with long read metagenome sequencing

Abstract New long read sequencing technologies offer huge potential for effective recovery of complete, closed genomes from complex microbial communities. Using long read data (ONT MinION) obtained from an ensemble of activated sludge enrichment bioreactors we recover 22 closed or complete genomes o...

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Bibliographic Details
Main Authors: Krithika Arumugam, Irina Bessarab, Mindia A. S. Haryono, Xianghui Liu, Rogelio E. Zuniga–Montanez, Samarpita Roy, Guanglei Qiu, Daniela I. Drautz–Moses, Ying Yu Law, Stefan Wuertz, Federico M. Lauro, Daniel H. Huson, Rohan B. H. Williams
Format: Article
Language:English
Published: Nature Publishing Group 2021-03-01
Series:npj Biofilms and Microbiomes
Online Access:https://doi.org/10.1038/s41522-021-00196-6

Internet

https://doi.org/10.1038/s41522-021-00196-6

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