DESMAN: a new tool for de novo extraction of strains from metagenomes

DESMAN: a new tool for de novo extraction of strains from metagenomes

Abstract We introduce DESMAN for De novo Extraction of Strains from Metagenomes. Large multi-sample metagenomes are being generated but strain variation results in fragmentary co-assemblies. Current algorithms can bin contigs into metagenome-assembled genomes but are unable to resolve strain-level v...

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Bibliographic Details
Main Authors: Christopher Quince, Tom O. Delmont, Sébastien Raguideau, Johannes Alneberg, Aaron E. Darling, Gavin Collins, A. Murat Eren
Format: Article
Language:English
Published: BMC 2017-09-01
Series:Genome Biology
Subjects:
Metagenomes
Strain
Niche
Online Access:http://link.springer.com/article/10.1186/s13059-017-1309-9

Internet

http://link.springer.com/article/10.1186/s13059-017-1309-9

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