Rate variation in parasitic plants: correlated and uncorrelated patterns among plastid genes of different function

by dePamphilis Claude W, Young Nelson D
Published 2005-02-01

Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus <it>Cuscuta</it>

by Kuehl Jennifer V, Boore Jeffrey L, McNeal Joel R, de Pamphilis Claude W
Published 2007-10-01

<it>De novo </it>characterization of the gametophyte transcriptome in bracken fern, <it>Pteridium aquilinum</it>

by Wickett Norman J, Barker Michael S, Der Joshua P, dePamphilis Claude W, Wolf Paul G
Published 2011-02-01

Conservation and divergence of microRNAs in <it>Populus</it>

by dePamphilis Claude W, DiLoreto Scott, Wall Phillip K, Barakat Abdelali, Carlson John E
Published 2007-12-01

Systematics and plastid genome evolution of the cryptically photosynthetic parasitic plant genus <it>Cuscuta </it>(Convolvulaceae)

by Kuehl Jennifer V, Arumugunathan Kathiravetpilla, McNeal Joel R, Boore Jeffrey L, dePamphilis Claude W
Published 2007-12-01

Chasing the hare - Evaluating the phylogenetic utility of a nuclear single copy gene region at and below species level within the species rich group <it>Peperomia </it>(Piperaceae)

by Naumann Julia, Symmank Lars, Samain Marie-Stéphanie, Müller Kai F, Neinhuis Christoph, dePamphilis Claude W, Wanke Stefan
Published 2011-12-01

Adaptive evolution of chloroplast genome structure inferred using a parametric bootstrap approach

by Stern David B, Rymarquis Linda, Tang Jijun, Wang Li-San, Leebens-Mack Jim, Cui Liying, dePamphilis Claude W
Published 2006-02-01

Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries

by Marion Josh, Wall P Kerr, Cui Liying, Lindsay Bruce G, Wang Ji-Ping Z, Zhang Jiaxuan, dePamphilis Claude W
Published 2005-12-01

Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants

by Croom Henrietta B, Coat Gwen, Lim Seok-Hong, McNeal Joel R, Barkman Todd J, Young Nelson D, dePamphilis Claude W
Published 2007-12-01

Complete plastid genome sequences of <it>Drimys, Liriodendron</it>, and <it>Piper</it>: implications for the phylogenetic relationships of magnoliids

by dePamphilis Claude W, Carlson John E, Leebens-Mack James, Kuehl Jennifer V, Penaflor Cynthia, Cai Zhengqiu, Boore Jeffrey L, Jansen Robert K
Published 2006-10-01

Identification of shared single copy nuclear genes in <it>Arabidopsis, Populus, Vitis </it>and <it>Oryza </it>and their phylogenetic utility across various taxonomic levels

by Ma Hong, Landherr Lena L, Edger Patrick P, Wall P Kerr, Duarte Jill M, Pires J Chris, Leebens-Mack Jim, dePamphilis Claude W
Published 2010-02-01

Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae

by Shirk Andrew J, Qiu Yin-Long, Mower Jeffrey P, Parkinson Christopher L, Song Keming, Young Nelson D, dePamphilis Claude W, Palmer Jeffrey D
Published 2005-12-01

Single-Copy Nuclear Genes Place Haustorial Hydnoraceae within Piperales and Reveal a Cretaceous Origin of Multiple Parasitic Angiosperm Lineages

by Naumann, Julia, Salomo, Karsten, Der, Joshua P., Wafula, Eric K., Bolin, Jay F., Maass, Erika, Frenzke, Lena, Samain, Marie-Stéphanie, Neinhuis, Christoph, dePamphilis, Claude W., Wanke, Stefan
Published 2014

Detecting and characterizing the highly divergent plastid genome of the nonphotosynthetic parasitic plant Hydnora visseri (Hydnoraceae)

by Naumann, Julia, Der, Joshua P., Wafula, Eric K., Jones, Samuel S., Wagner, Sarah T., Honaas, Loren A., Ralph, Paula E., Bolin, Jay F., Maass, Erika, Neinhuis, Christoph, Wanke, Stefan, dePamphilis , Claude W.
Published 2016

A phylogenomic assessment of ancient polyploidy and genome evolution across the Poales

by McKain, Michael R., Tang, Haibao, McNeal, Joel R., Ayyampalayam, Saravanaraj, Davis, Jerrold I., dePamphilis, Claude W., Givnish, Thomas J., Pires, J. Chris, Stevenson, Dennis Wm., Leebens-Mack, Jim H.
Published 2016

Comparison of next generation sequencing technologies for transcriptome characterization

by Soltis Douglas E, Schuster Stephan C, Ma Hong, Carlson John E, Hu Yi, Tomsho Lynn P, Landherr Lena, Liang Haiying, Wolcott Erik, Chanderbali André S, Barakat Abdelali, Leebens-Mack Jim, Wall P Kerr, Soltis Pamela S, Altman Naomi, dePamphilis Claude W
Published 2009-08-01

Floral gene resources from basal angiosperms for comparative genomics research

by Zhang Xiaohong, Bliss Barbara J, Schlarbaum Scott E, Perl-Treves Rafael, Frohlich Michael W, Yoo Mi-Jeong, Kim Sangtae, Buzgo Matyas, Hu Yi, Landherr Lena L, Mueller Lukas A, Solow Teri M, Ilut Daniel C, Wall P Kerr, Farmerie William G, Carlson John E, Soltis Douglas E, Albert Victor A, Tanksley Steven D, Oppenheimer David G, Soltis Pamela S, Ma Hong, dePamphilis Claude W, Leebens-Mack James H
Published 2005-03-01