The phzA2-G2 transcript exhibits direct RsmA-mediated activation in Pseudomonas aeruginosa M18.

by Bin Ren, Huifeng Shen, Zhi John Lu, Haiming Liu, Yuquan Xu
Published 2014-01-01

RNA Biomarkers: Frontier of Precision Medicine for Cancer

by Xiaochen Xi, Tianxiao Li, Yiming Huang, Jiahui Sun, Yumin Zhu, Yang Yang, Zhi John Lu
Published 2017-02-01

Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA–protein binding sites

by Yang Eric Li, Mu Xiao, Binbin Shi, Yu-Cheng T. Yang, Dong Wang, Fei Wang, Marco Marcia, Zhi John Lu
Published 2017-09-01

Regulatory feedback loop of two phz gene clusters through 5'-untranslated regions in Pseudomonas sp. M18.

by Yaqian Li, Xilin Du, Zhi John Lu, Daqiang Wu, Yilei Zhao, Bin Ren, Jiaofang Huang, Xianqing Huang, Yuhong Xu, Yuquan Xu
Published 2011-01-01

Integrative genomic analysis of early neurogenesis reveals a temporal genetic program for differentiation and specification of preplate and Cajal-Retzius neurons.

by Jia Li, Lei Sun, Xue-Liang Peng, Xiao-Ming Yu, Shao-Jun Qi, Zhi John Lu, Jing-Dong J Han, Qin Shen
Published 2021-03-01

MiRmat: mature microRNA sequence prediction.

by Chenfeng He, Ying-Xin Li, Guangxin Zhang, Zuguang Gu, Rong Yang, Jie Li, Zhi John Lu, Zhi-Hua Zhou, Chenyu Zhang, Jin Wang
Published 2012-01-01

Construction and analysis of an integrated regulatory network derived from high-throughput sequencing data.

by Chao Cheng, Koon-Kiu Yan, Woochang Hwang, Jiang Qian, Nitin Bhardwaj, Joel Rozowsky, Zhi John Lu, Wei Niu, Pedro Alves, Masaomi Kato, Michael Snyder, Mark Gerstein
Published 2011-11-01

Recurrently deregulated lncRNAs in hepatocellular carcinoma

by Yang Yang, Lei Chen, Jin Gu, Hanshuo Zhang, Jiapei Yuan, Qiuyu Lian, Guishuai Lv, Siqi Wang, Yang Wu, Yu-Cheng T. Yang, Dongfang Wang, Yang Liu, Jing Tang, Guijuan Luo, Yang Li, Long Hu, Xinbao Sun, Dong Wang, Mingzhou Guo, Qiaoran Xi, Jianzhong Xi, Hongyang Wang, Michael Q. Zhang, Zhi John Lu
Published 2017-02-01

Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response.

by Mei Zhong, Wei Niu, Zhi John Lu, Mihail Sarov, John I Murray, Judith Janette, Debasish Raha, Karyn L Sheaffer, Hugo Y K Lam, Elicia Preston, Cindie Slightham, LaDeana W Hillier, Trisha Brock, Ashish Agarwal, Raymond Auerbach, Anthony A Hyman, Mark Gerstein, Susan E Mango, Stuart K Kim, Robert H Waterston, Valerie Reinke, Michael Snyder
Published 2010-02-01