Imputation from SNP chip to sequence: a case study in a Chinese indigenous chicken population

by Shaopan Ye, Xiaolong Yuan, Xiran Lin, Ning Gao, Yuanyu Luo, Zanmou Chen, Jiaqi Li, Xiquan Zhang, Zhe Zhang
Published 2018-03-01

Genome-Wide Association Study for Reproductive Traits in a Duroc Pig Population

by Zhe Zhang, Zitao Chen, Shaopan Ye, Yingting He, Shuwen Huang, Xiaolong Yuan, Zanmou Chen, Hao Zhang, Jiaqi Li
Published 2019-09-01

Genetic Diversity of Indigenous Pigs from South China Area Revealed by SNP Array

by Shuqi Diao, Shuwen Huang, Zhiting Xu, Shaopan Ye, Xiaolong Yuan, Zanmou Chen, Hao Zhang, Zhe Zhang, Jiaqi Li
Published 2019-06-01

Genome-Wide Signatures of Selection Detection in Three South China Indigenous Pigs

by Shuqi Diao, Shuwen Huang, Zitao Chen, Jinyan Teng, Yunlong Ma, Xiaolong Yuan, Zanmou Chen, Hao Zhang, Jiaqi Li, Zhe Zhang
Published 2019-05-01

Strategies for Obtaining and Pruning Imputed Whole-Genome Sequence Data for Genomic Prediction

by Shaopan Ye, Ning Gao, Rongrong Zheng, Zitao Chen, Jinyan Teng, Xiaolong Yuan, Hao Zhang, Zanmou Chen, Xiquan Zhang, Jiaqi Li, Zhe Zhang
Published 2019-07-01

New Insights From Imputed Whole-Genome Sequence-Based Genome-Wide Association Analysis and Transcriptome Analysis: The Genetic Mechanisms Underlying Residual Feed Intake in Chicken...

by Shaopan Ye, Zi-Tao Chen, Rongrong Zheng, Shuqi Diao, Jinyan Teng, Xiaolong Yuan, Hao Zhang, Zanmou Chen, Xiquan Zhang, Jiaqi Li, Zhe Zhang
Published 2020-04-01