Mass Spectrometry as a Tool to Enhance "-omics" Education

by Michael J. Wolyniak, Nathan S. Reyna, Ruth Plymale, Welkin H. Pope, Daniel E. Westholm
Published 2018-05-01

Staphylococci phages display vast genomic diversity and evolutionary relationships

by Hugo Oliveira, Marta Sampaio, Luís D. R. Melo, Oscar Dias, Welkin H. Pope, Graham F. Hatfull, Joana Azeredo
Published 2019-05-01

Capsids and Genomes of Jumbo-Sized Bacteriophages Reveal the Evolutionary Reach of the HK97 Fold

by Jianfei Hua, Alexis Huet, Carlos A. Lopez, Katerina Toropova, Welkin H. Pope, Robert L. Duda, Roger W. Hendrix, James F. Conway, Vincent R. Racaniello
Published 2017-10-01

Bacteriophages of Gordonia spp. Display a Spectrum of Diversity and Genetic Relationships

by Welkin H. Pope, Travis N. Mavrich, Rebecca A. Garlena, Carlos A. Guerrero-Bustamante, Deborah Jacobs-Sera, Matthew T. Montgomery, Daniel A. Russell, Marcie H. Warner, Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science (SEA-PHAGES), Graham F. Hatfull, Richard Losick
Published 2017-08-01

Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity

by Welkin H Pope, Charles A Bowman, Daniel A Russell, Deborah Jacobs-Sera, David J Asai, Steven G Cresawn, William R Jacobs Jr, Roger W Hendrix, Jeffrey G Lawrence, Graham F Hatfull, Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science, Phage Hunters Integrating Research and Education, Mycobacterial Genetics Course
Published 2015-04-01

Cluster J mycobacteriophages: intron splicing in capsid and tail genes.

by Welkin H Pope, Deborah Jacobs-Sera, Aaron A Best, Gregory W Broussard, Pamela L Connerly, Rebekah M Dedrick, Timothy A Kremer, Susan Offner, Amenawon H Ogiefo, Marie C Pizzorno, Kate Rockenbach, Daniel A Russell, Emily L Stowe, Joseph Stukey, Sarah A Thibault, James F Conway, Roger W Hendrix, Graham F Hatfull
Published 2013-01-01

Cluster K mycobacteriophages: insights into the evolutionary origins of mycobacteriophage TM4.

by Welkin H Pope, Christina M Ferreira, Deborah Jacobs-Sera, Robert C Benjamin, Ariangela J Davis, Randall J DeJong, Sarah C R Elgin, Forrest R Guilfoile, Mark H Forsyth, Alexander D Harris, Samuel E Harvey, Lee E Hughes, Peter M Hynes, Arrykka S Jackson, Marilyn D Jalal, Elizabeth A MacMurray, Coreen M Manley, Molly J McDonough, Jordan L Mosier, Larissa J Osterbann, Hannah S Rabinowitz, Corwin N Rhyan, Daniel A Russell, Margaret S Saha, Christopher D Shaffer, Stephanie E Simon, Erika F Sims, Isabel G Tovar, Emilie G Weisser, John T Wertz, Kathleen A Weston-Hafer, Kurt E Williamson, Bo Zhang, Steven G Cresawn, Paras Jain, Mariana Piuri, William R Jacobs, Roger W Hendrix, Graham F Hatfull
Published 2011-01-01

Comparative genomics of Cluster O mycobacteriophages.

by Steven G Cresawn, Welkin H Pope, Deborah Jacobs-Sera, Charles A Bowman, Daniel A Russell, Rebekah M Dedrick, Tamarah Adair, Kirk R Anders, Sarah Ball, David Bollivar, Caroline Breitenberger, Sandra H Burnett, Kristen Butela, Deanna Byrnes, Sarah Carzo, Kathleen A Cornely, Trevor Cross, Richard L Daniels, David Dunbar, Ann M Findley, Chris R Gissendanner, Urszula P Golebiewska, Grant A Hartzog, J Robert Hatherill, Lee E Hughes, Chernoh S Jalloh, Carla De Los Santos, Kevin Ekanem, Sphindile L Khambule, Rodney A King, Christina King-Smith, Karen Klyczek, Greg P Krukonis, Christian Laing, Jonathan S Lapin, A Javier Lopez, Sipho M Mkhwanazi, Sally D Molloy, Deborah Moran, Vanisha Munsamy, Eddie Pacey, Ruth Plymale, Marianne Poxleitner, Nathan Reyna, Joel F Schildbach, Joseph Stukey, Sarah E Taylor, Vassie C Ware, Amanda L Wellmann, Daniel Westholm, Donna Wodarski, Michelle Zajko, Thabiso S Zikalala, Roger W Hendrix, Graham F Hatfull
Published 2015-01-01

Genomic diversity of bacteriophages infecting Microbacterium spp.

by Deborah Jacobs-Sera, Lawrence A Abad, Richard M Alvey, Kirk R Anders, Haley G Aull, Suparna S Bhalla, Lawrence S Blumer, David W Bollivar, J Alfred Bonilla, Kristen A Butela, Roy J Coomans, Steven G Cresawn, Tom D'Elia, Arturo Diaz, Ashley M Divens, Nicholas P Edgington, Gregory D Frederick, Maria D Gainey, Rebecca A Garlena, Kenneth W Grant, Susan M R Gurney, Heather L Hendrickson, Lee E Hughes, Margaret A Kenna, Karen K Klyczek, Hari Kotturi, Travis N Mavrich, Angela L McKinney, Evan C Merkhofer, Jordan Moberg Parker, Sally D Molloy, Denise L Monti, Dana A Pape-Zambito, Richard S Pollenz, Welkin H Pope, Nathan S Reyna, Claire A Rinehart, Daniel A Russell, Christopher D Shaffer, Viknesh Sivanathan, Ty H Stoner, Joseph Stukey, C Nicole Sunnen, Sara S Tolsma, Philippos K Tsourkas, Jamie R Wallen, Vassie C Ware, Marcie H Warner, Jacqueline M Washington, Kristi M Westover, JoAnn L Whitefleet-Smith, Helen I Wiersma-Koch, Daniel C Williams, Kira M Zack, Graham F Hatfull
Published 2020-01-01

Tales of diversity: Genomic and morphological characteristics of forty-six Arthrobacter phages.

by Karen K Klyczek, J Alfred Bonilla, Deborah Jacobs-Sera, Tamarah L Adair, Patricia Afram, Katherine G Allen, Megan L Archambault, Rahat M Aziz, Filippa G Bagnasco, Sarah L Ball, Natalie A Barrett, Robert C Benjamin, Christopher J Blasi, Katherine Borst, Mary A Braun, Haley Broomell, Conner B Brown, Zachary S Brynell, Ashley B Bue, Sydney O Burke, William Casazza, Julia A Cautela, Kevin Chen, Nitish S Chimalakonda, Dylan Chudoff, Jade A Connor, Trevor S Cross, Kyra N Curtis, Jessica A Dahlke, Bethany M Deaton, Sarah J Degroote, Danielle M DeNigris, Katherine C DeRuff, Milan Dolan, David Dunbar, Marisa S Egan, Daniel R Evans, Abby K Fahnestock, Amal Farooq, Garrett Finn, Christopher R Fratus, Bobby L Gaffney, Rebecca A Garlena, Kelly E Garrigan, Bryan C Gibbon, Michael A Goedde, Carlos A Guerrero Bustamante, Melinda Harrison, Megan C Hartwell, Emily L Heckman, Jennifer Huang, Lee E Hughes, Kathryn M Hyduchak, Aswathi E Jacob, Machika Kaku, Allen W Karstens, Margaret A Kenna, Susheel Khetarpal, Rodney A King, Amanda L Kobokovich, Hannah Kolev, Sai A Konde, Elizabeth Kriese, Morgan E Lamey, Carter N Lantz, Jonathan S Lapin, Temiloluwa O Lawson, In Young Lee, Scott M Lee, Julia Y Lee-Soety, Emily M Lehmann, Shawn C London, A Javier Lopez, Kelly C Lynch, Catherine M Mageeney, Tetyana Martynyuk, Kevin J Mathew, Travis N Mavrich, Christopher M McDaniel, Hannah McDonald, C Joel McManus, Jessica E Medrano, Francis E Mele, Jennifer E Menninger, Sierra N Miller, Josephine E Minick, Courtney T Nabua, Caroline K Napoli, Martha Nkangabwa, Elizabeth A Oates, Cassandra T Ott, Sarah K Pellerino, William J Pinamont, Ross T Pirnie, Marie C Pizzorno, Emilee J Plautz, Welkin H Pope, Katelyn M Pruett, Gabbi Rickstrew, Patrick A Rimple, Claire A Rinehart, Kayla M Robinson, Victoria A Rose, Daniel A Russell, Amelia M Schick, Julia Schlossman, Victoria M Schneider, Chloe A Sells, Jeremy W Sieker, Morgan P Silva, Marissa M Silvi, Stephanie E Simon, Amanda K Staples, Isabelle L Steed, Emily L Stowe, Noah A Stueven, Porter T Swartz, Emma A Sweet, Abigail T Sweetman, Corrina Tender, Katrina Terry, Chrystal Thomas, Daniel S Thomas, Allison R Thompson, Lorianna Vanderveen, Rohan Varma, Hannah L Vaught, Quynh D Vo, Zachary T Vonberg, Vassie C Ware, Yasmene M Warrad, Kaitlyn E Wathen, Jonathan L Weinstein, Jacqueline F Wyper, Jakob R Yankauskas, Christine Zhang, Graham F Hatfull
Published 2017-01-01

Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution.

by Welkin H Pope, Deborah Jacobs-Sera, Daniel A Russell, Craig L Peebles, Zein Al-Atrache, Turi A Alcoser, Lisa M Alexander, Matthew B Alfano, Samantha T Alford, Nichols E Amy, Marie D Anderson, Alexander G Anderson, Andrew A S Ang, Manuel Ares, Amanda J Barber, Lucia P Barker, Jonathan M Barrett, William D Barshop, Cynthia M Bauerle, Ian M Bayles, Katherine L Belfield, Aaron A Best, Agustin Borjon, Charles A Bowman, Christine A Boyer, Kevin W Bradley, Victoria A Bradley, Lauren N Broadway, Keshav Budwal, Kayla N Busby, Ian W Campbell, Anne M Campbell, Alyssa Carey, Steven M Caruso, Rebekah D Chew, Chelsea L Cockburn, Lianne B Cohen, Jeffrey M Corajod, Steven G Cresawn, Kimberly R Davis, Lisa Deng, Dee R Denver, Breyon R Dixon, Sahrish Ekram, Sarah C R Elgin, Angela E Engelsen, Belle E V English, Marcella L Erb, Crystal Estrada, Laura Z Filliger, Ann M Findley, Lauren Forbes, Mark H Forsyth, Tyler M Fox, Melissa J Fritz, Roberto Garcia, Zindzi D George, Anne E Georges, Christopher R Gissendanner, Shannon Goff, Rebecca Goldstein, Kobie C Gordon, Russell D Green, Stephanie L Guerra, Krysta R Guiney-Olsen, Bridget G Guiza, Leila Haghighat, Garrett V Hagopian, Catherine J Harmon, Jeremy S Harmson, Grant A Hartzog, Samuel E Harvey, Siping He, Kevin J He, Kaitlin E Healy, Ellen R Higinbotham, Erin N Hildebrandt, Jason H Ho, Gina M Hogan, Victoria G Hohenstein, Nathan A Holz, Vincent J Huang, Ericka L Hufford, Peter M Hynes, Arrykka S Jackson, Erica C Jansen, Jonathan Jarvik, Paul G Jasinto, Tuajuanda C Jordan, Tomas Kasza, Murray A Katelyn, Jessica S Kelsey, Larisa A Kerrigan, Daryl Khaw, Junghee Kim, Justin Z Knutter, Ching-Chung Ko, Gail V Larkin, Jennifer R Laroche, Asma Latif, Kohana D Leuba, Sequoia I Leuba, Lynn O Lewis, Kathryn E Loesser-Casey, Courtney A Long, A Javier Lopez, Nicholas Lowery, Tina Q Lu, Victor Mac, Isaac R Masters, Jazmyn J McCloud, Molly J McDonough, Andrew J Medenbach, Anjali Menon, Rachel Miller, Brandon K Morgan, Patrick C Ng, Elvis Nguyen, Katrina T Nguyen, Emilie T Nguyen, Kaylee M Nicholson, Lindsay A Parnell, Caitlin E Peirce, Allison M Perz, Luke J Peterson, Rachel E Pferdehirt, Seegren V Philip, Kit Pogliano, Joe Pogliano, Tamsen Polley, Erica J Puopolo, Hannah S Rabinowitz, Michael J Resiss, Corwin N Rhyan, Yetta M Robinson, Lauren L Rodriguez, Andrew C Rose, Jeffrey D Rubin, Jessica A Ruby, Margaret S Saha, James W Sandoz, Judith Savitskaya, Dale J Schipper, Christine E Schnitzler, Amanda R Schott, J Bradley Segal, Christopher D Shaffer, Kathryn E Sheldon, Erica M Shepard, Jonathan W Shepardson, Madav K Shroff, Jessica M Simmons, Erika F Simms, Brandy M Simpson, Kathryn M Sinclair, Robert L Sjoholm, Ingrid J Slette, Blaire C Spaulding, Clark L Straub, Joseph Stukey, Trevor Sughrue, Tin-Yun Tang, Lyons M Tatyana, Stephen B Taylor, Barbara J Taylor, Louise M Temple, Jasper V Thompson, Michael P Tokarz, Stephanie E Trapani, Alexander P Troum, Jonathan Tsay, Anthony T Tubbs, Jillian M Walton, Danielle H Wang, Hannah Wang, John R Warner, Emilie G Weisser, Samantha C Wendler, Kathleen A Weston-Hafer, Hilary M Whelan, Kurt E Williamson, Angelica N Willis, Hannah S Wirtshafter, Theresa W Wong, Phillip Wu, Yun jeong Yang, Brandon C Yee, David A Zaidins, Bo Zhang, Melina Y Zúniga, Roger W Hendrix, Graham F Hatfull
Published 2011-01-01