Learning From Limited Data: Towards Best Practice Techniques for Antimicrobial Resistance Prediction From Whole Genome Sequencing Data

by Lukas Lüftinger, Lukas Lüftinger, Peter Májek, Stephan Beisken, Thomas Rattei, Andreas E. Posch
Published 2021-02-01

Analytical Performance Validation of Next-Generation Sequencing Based Clinical Microbiology Assays Using a K-mer Analysis Workflow

by Sarah Lepuschitz, Thomas Weinmaier, Katharina Mrazek, Stephan Beisken, Johannes Weinberger, Andreas E. Posch
Published 2020-08-01

Clinical Resistome Screening of 1,110 Escherichia coli Isolates Efficiently Recovers Diagnostically Relevant Antibiotic Resistance Biomarkers and Potential Novel Resistance Mechani...

by Carsten Volz, Jonas Ramoni, Stephan Beisken, Valentina Galata, Andreas Keller, Achim Plum, Andreas E. Posch, Rolf Müller, Rolf Müller
Published 2019-08-01

Predictive Antibiotic Susceptibility Testing by Next-Generation Sequencing for Periprosthetic Joint Infections: Potential and Limitations

by Lukas Lüftinger, Ines Ferreira, Bernhard J. H. Frank, Stephan Beisken, Johannes Weinberger, Arndt von Haeseler, Thomas Rattei, Jochen G. Hofstaetter, Andreas E. Posch, Arne Materna
Published 2021-07-01

Genomic and Phenotypic Analysis of Linezolid-Resistant <i>Staphylococcus epidermidis</i> in a Tertiary Hospital in Innsbruck, Austria

by Silke Huber, Miriam A. Knoll, Michael Berktold, Reinhard Würzner, Anita Brindlmayer, Viktoria Weber, Andreas E. Posch, Katharina Mrazek, Sarah Lepuschitz, Michael Ante, Stephan Beisken, Dorothea Orth-Höller, Johannes Weinberger
Published 2021-05-01

Culture-Free Detection of Antibiotic Resistance Markers from Native Patient Samples by Hybridization Capture Sequencing

by Ines Ferreira, Sarah Lepuschitz, Stephan Beisken, Giuseppe Fiume, Katharina Mrazek, Bernhard J. H. Frank, Silke Huber, Miriam A. Knoll, Arndt von Haeseler, Arne Materna, Jochen G. Hofstaetter, Andreas E. Posch, Johannes Weinberger
Published 2021-08-01