Gene Prediction with a Hidden Markov Model

by Stanke, Mario
Published 2004

Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources

by Morgenstern Burkhard, Schöffmann Oliver, Stanke Mario, Waack Stephan
Published 2006-02-01

Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species

by Kollmar Martin, Stanke Mario, Odronitz Florian, Keller Oliver, Waack Stephan
Published 2008-06-01

Detection of viral sequence fragments of HIV-1 subfamilies yet unknown

by Stanke Mario, Morgenstern Burkhard, Bulla Jan, Schultz Anne-Kathrin, Unterthiner Thomas, Bulla Ingo
Published 2011-04-01

A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes

by Korber Bette, Kuiken Carla, Leitner Thomas, Zhang Ming, Schultz Anne-Kathrin, Morgenstern Burkhard, Stanke Mario
Published 2006-05-01

The role of recombination in the emergence of a complex and dynamic HIV epidemic

by Morgenstern Burkhard, Stanke Mario, Bulla Ingo, Macke Jennifer P, Schultz Anne-Kathrin, Foley Brian, Zhang Ming, Korber Bette, Leitner Thomas
Published 2010-03-01

Improvement of the jpHMM approach to recombination detection in viral genomes and its application to HIV and HBV

by Schultz, Anne-Kathrin
Published 2011