Mapping and Dynamics of Regulatory DNA in Maturing Arabidopsis thaliana Siliques

by Alessandra M. Sullivan, Andrej A. Arsovski, Agnieszka Thompson, Richard Sandstrom, Robert E. Thurman, Shane Neph, Audra K. Johnson, Shawn T. Sullivan, Peter J. Sabo, Fidencio V. Neri, Molly Weaver, Morgan Diegel, Jennifer L. Nemhauser, John A. Stamatoyannopoulos, Kerry L. Bubb, Christine Queitsch
Published 2019-11-01

Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C

by Zev N. Kronenberg, Arang Rhie, Sergey Koren, Gregory T. Concepcion, Paul Peluso, Katherine M. Munson, David Porubsky, Kristen Kuhn, Kathryn A. Mueller, Wai Yee Low, Stefan Hiendleder, Olivier Fedrigo, Ivan Liachko, Richard J. Hall, Adam M. Phillippy, Evan E. Eichler, John L. Williams, Timothy P. L. Smith, Erich D. Jarvis, Shawn T. Sullivan, Sarah B. Kingan
Published 2021-04-01

Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation

by Derek M. Bickhart, Mick Watson, Sergey Koren, Kevin Panke-Buisse, Laura M. Cersosimo, Maximilian O. Press, Curtis P. Van Tassell, Jo Ann S. Van Kessel, Bradd J. Haley, Seon Woo Kim, Cheryl Heiner, Garret Suen, Kiranmayee Bakshy, Ivan Liachko, Shawn T. Sullivan, Phillip R. Myer, Jay Ghurye, Mihai Pop, Paul J. Weimer, Adam M. Phillippy, Timothy P. L. Smith
Published 2019-08-01

Genomic Resources to Guide Improvement of the Shea Tree

by Iago Hale, Xiao Ma, Xiao Ma, Arthur T. O. Melo, Francis Kwame Padi, Prasad S. Hendre, Sarah B. Kingan, Shawn T. Sullivan, Shiyu Chen, Jean-Marc Boffa, Alice Muchugi, Alice Muchugi, Agyemang Danquah, Michael Teye Barnor, Ramni Jamnadass, Yves Van de Peer, Yves Van de Peer, Yves Van de Peer, Yves Van de Peer, Allen Van Deynze, Allen Van Deynze
Published 2021-09-01

Mapping and Dynamics of Regulatory DNA and Transcription Factor Networks in A. thaliana

by Alessandra M. Sullivan, Andrej A. Arsovski, Janne Lempe, Kerry L. Bubb, Matthew T. Weirauch, Peter J. Sabo, Richard Sandstrom, Robert E. Thurman, Shane Neph, Alex P. Reynolds, Andrew B. Stergachis, Benjamin Vernot, Audra K. Johnson, Eric Haugen, Shawn T. Sullivan, Agnieszka Thompson, Fidencio V. Neri III, Molly Weaver, Morgan Diegel, Sanie Mnaimneh, Ally Yang, Timothy R. Hughes, Jennifer L. Nemhauser, Christine Queitsch, John A. Stamatoyannopoulos
Published 2014-09-01