Whole genome sequence of Oscheius sp. TEL-2014 entomopathogenic nematodes isolated from South Africa

by Tiisetso E. Lephoto, Phelelani T. Mpangase, Shaun Aron, Vincent M. Gray
Published 2016-03-01

The Development of a Sustainable Bioinformatics Training Environment Within the H3Africa Bioinformatics Network (H3ABioNet)

by Shaun Aron, Paballo Abel Chauke, Verena Ras, Sumir Panji, Katherine Johnston, Nicola Mulder
Published 2021-09-01

Functional characterisation of the transcriptome from leaf tissue of the fluoroacetate-producing plant, Dichapetalum cymosum, in response to mechanical wounding

by Selisha A. Sooklal, Phelelani T. Mpangase, Mihai-Silviu Tomescu, Shaun Aron, Scott Hazelhurst, Robert H. Archer, Karl Rumbold
Published 2020-11-01

SWATH-MS based proteomic profiling of pancreatic ductal adenocarcinoma tumours reveals the interplay between the extracellular matrix and related intracellular pathways.

by Ekene Emmanuel Nweke, Previn Naicker, Shaun Aron, Stoyan Stoychev, John Devar, David L Tabb, Jones Omoshoro-Jones, Martin Smith, Geoffrey Candy
Published 2020-01-01

Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa.

by Verena Ras, Gerrit Botha, Shaun Aron, Katie Lennard, Imane Allali, Shantelle Claassen-Weitz, Kilaza Samson Mwaikono, Dane Kennedy, Jessica R Holmes, Gloria Rendon, Sumir Panji, Christopher J Fields, Nicola Mulder
Published 2021-02-01

Whole-genome sequencing for an enhanced understanding of genetic variation among South Africans

by Ananyo Choudhury, Michèle Ramsay, Scott Hazelhurst, Shaun Aron, Soraya Bardien, Gerrit Botha, Emile R. Chimusa, Alan Christoffels, Junaid Gamieldien, Mahjoubeh J. Sefid-Dashti, Fourie Joubert, Ayton Meintjes, Nicola Mulder, Raj Ramesar, Jasper Rees, Kathrine Scholtz, Dhriti Sengupta, Himla Soodyall, Philip Venter, Louise Warnich, Michael S. Pepper
Published 2017-12-01

Genetic substructure and complex demographic history of South African Bantu speakers

by Dhriti Sengupta, Ananyo Choudhury, Cesar Fortes-Lima, Shaun Aron, Gavin Whitelaw, Koen Bostoen, Hilde Gunnink, Natalia Chousou-Polydouri, Peter Delius, Stephen Tollman, F. Xavier Gómez-Olivé, Shane Norris, Felistas Mashinya, Marianne Alberts, AWI-Gen Study, H3Africa Consortium, Scott Hazelhurst, Carina M. Schlebusch, Michèle Ramsay
Published 2021-04-01

Designing a course model for distance-based online bioinformatics training in Africa: The H3ABioNet experience.

by Kim T Gurwitz, Shaun Aron, Sumir Panji, Suresh Maslamoney, Pedro L Fernandes, David P Judge, Amel Ghouila, Jean-Baka Domelevo Entfellner, Fatma Z Guerfali, Colleen Saunders, Ahmed Mansour Alzohairy, Samson P Salifu, Rehab Ahmed, Ruben Cloete, Jonathan Kayondo, Deogratius Ssemwanga, Nicola Mulder, H3ABioNet Consortium's Education Training and Working Group as members of the H3Africa Consortium
Published 2017-10-01

Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience [version 2; peer review: 2 approved, 1 approved with reservations]

by Azza E. Ahmed, Phelelani T. Mpangase, Sumir Panji, Shakuntala Baichoo, Yassine Souilmi, Faisal M. Fadlelmola, Mustafa Alghali, Shaun Aron, Hocine Bendou, Eugene De Beste, Mamana Mbiyavanga, Oussema Souiai, Long Yi, Jennie Zermeno, Don Armstrong, Brian D. O'Connor, Liudmila Sergeevna Mainzer, Michael R. Crusoe, Ayton Meintjes, Peter Van Heusden, Gerrit Botha, Fourie Joubert, C. Victor Jongeneel, Scott Hazelhurst, Nicola Mulder
Published 2019-08-01

Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics

by Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Scott Hazelhurst, Hocine Bendou, Eugene de Beste, Phelelani T. Mpangase, Oussema Souiai, Mustafa Alghali, Long Yi, Brian D. O’Connor, Michael Crusoe, Don Armstrong, Shaun Aron, Fourie Joubert, Azza E. Ahmed, Mamana Mbiyavanga, Peter van Heusden, Lerato E. Magosi, Jennie Zermeno, Liudmila Sergeevna Mainzer, Faisal M. Fadlelmola, C. Victor Jongeneel, Nicola Mulder
Published 2018-11-01

Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.

by C Victor Jongeneel, Ovokeraye Achinike-Oduaran, Ezekiel Adebiyi, Marion Adebiyi, Seun Adeyemi, Bola Akanle, Shaun Aron, Efejiro Ashano, Hocine Bendou, Gerrit Botha, Emile Chimusa, Ananyo Choudhury, Ravikiran Donthu, Jenny Drnevich, Oluwadamila Falola, Christopher J Fields, Scott Hazelhurst, Liesl Hendry, Itunuoluwa Isewon, Radhika S Khetani, Judit Kumuthini, Magambo Phillip Kimuda, Lerato Magosi, Liudmila Sergeevna Mainzer, Suresh Maslamoney, Mamana Mbiyavanga, Ayton Meintjes, Danny Mugutso, Phelelani Mpangase, Richard Munthali, Victoria Nembaware, Andrew Ndhlovu, Trust Odia, Adaobi Okafor, Olaleye Oladipo, Sumir Panji, Venesa Pillay, Gloria Rendon, Dhriti Sengupta, Nicola Mulder
Published 2017-06-01