Agrometeorological and Morpho-Physiological Studies of the Response of Red Currant to Abiotic Stresses

by Olga Panfilova, Mikhail Tsoy, Olga Golyaeva, Sergey Knyazev, Mikhail Karpukhin
Published 2021-07-01

Using earth mover’s distance for viral outbreak investigations

by Andrew Melnyk, Sergey Knyazev, Fredrik Vannberg, Leonid Bunimovich, Pavel Skums, Alex Zelikovsky
Published 2020-12-01

Inference of genetic relatedness between viral quasispecies from sequencing data

by Olga Glebova, Sergey Knyazev, Andrew Melnyk, Alexander Artyomenko, Yury Khudyakov, Alex Zelikovsky, Pavel Skums
Published 2017-12-01

Molecular Epidemiology of the HIV-1 Subtype B Sub-Epidemic in Bulgaria

by Ivailo Alexiev, Ellsworth M. Campbell, Sergey Knyazev, Yi Pan, Lyubomira Grigorova, Reneta Dimitrova, Aleksandra Partsuneva, Anna Gancheva, Asya Kostadinova, Carole Seguin-Devaux, William M. Switzer
Published 2020-04-01

Molecular Epidemiological Analysis of the Origin and Transmission Dynamics of the HIV-1 CRF01_AE Sub-Epidemic in Bulgaria

by Ivailo Alexiev, Ellsworth M. Campbell, Sergey Knyazev, Yi Pan, Lyubomira Grigorova, Reneta Dimitrova, Aleksandra Partsuneva, Anna Gancheva, Asya Kostadinova, Carole Seguin-Devaux, Ivaylo Elenkov, Nina Yancheva, William M. Switzer
Published 2021-01-01

Technology dictates algorithms: recent developments in read alignment

by Mohammed Alser, Jeremy Rotman, Dhrithi Deshpande, Kodi Taraszka, Huwenbo Shi, Pelin Icer Baykal, Harry Taegyun Yang, Victor Xue, Sergey Knyazev, Benjamin D. Singer, Brunilda Balliu, David Koslicki, Pavel Skums, Alex Zelikovsky, Can Alkan, Onur Mutlu, Serghei Mangul
Published 2021-08-01

Benchmarking of computational error-correction methods for next-generation sequencing data

by Keith Mitchell, Jaqueline J. Brito, Igor Mandric, Qiaozhen Wu, Sergey Knyazev, Sei Chang, Lana S. Martin, Aaron Karlsberg, Ekaterina Gerasimov, Russell Littman, Brian L. Hill, Nicholas C. Wu, Harry Taegyun Yang, Kevin Hsieh, Linus Chen, Eli Littman, Taylor Shabani, German Enik, Douglas Yao, Ren Sun, Jan Schroeder, Eleazar Eskin, Alex Zelikovsky, Pavel Skums, Mihai Pop, Serghei Mangul
Published 2020-03-01