Accuracy of Programs for the Determination of Human Leukocyte Antigen Alleles from Next-Generation Sequencing Data

by Antti Larjo, Robert Eveleigh, Elina Kilpeläinen, Tony Kwan, Tomi Pastinen, Satu Koskela, Jukka Partanen
Published 2017-12-01

HLA RNA Sequencing With Unique Molecular Identifiers Reveals High Allele-Specific Variability in mRNA Expression

by Tiira Johansson, Tiira Johansson, Dawit A. Yohannes, Satu Koskela, Jukka Partanen, Päivi Saavalainen, Päivi Saavalainen
Published 2021-02-01

Targeted RNA-Based Oxford Nanopore Sequencing for Typing 12 Classical HLA Genes

by Tiira Johansson, Tiira Johansson, Satu Koskela, Dawit A. Yohannes, Jukka Partanen, Päivi Saavalainen, Päivi Saavalainen
Published 2021-03-01

Meta-Analysis of Genome-Wide Association and Gene Expression Studies Implicates Donor T Cell Function and Cytokine Pathways in Acute GvHD

by Kati Hyvärinen, Satu Koskela, Riitta Niittyvuopio, Anne Nihtinen, Liisa Volin, Urpu Salmenniemi, Mervi Putkonen, Ismael Buño, David Gallardo, Maija Itälä-Remes, Jukka Partanen, Jarmo Ritari
Published 2020-02-01

Computational Analysis of HLA-presentation of Non-synonymous Recipient Mismatches Indicates Effect on the Risk of Chronic Graft-vs.-Host Disease After Allogeneic HSCT

by Jarmo Ritari, Kati Hyvärinen, Satu Koskela, Riitta Niittyvuopio, Anne Nihtinen, Urpu Salmenniemi, Mervi Putkonen, Liisa Volin, Tony Kwan, Tomi Pastinen, Tomi Pastinen, Maija Itälä-Remes, Jukka Partanen
Published 2019-07-01