Within-host stochastic emergence dynamics of immune-escape mutants.

by Matthew Hartfield, Samuel Alizon
Published 2015-03-01

Introducing the outbreak threshold in epidemiology.

by Matthew Hartfield, Samuel Alizon
Published 2013-01-01

Correction: Introducing the Outbreak Threshold in Epidemiology.

by Matthew Hartfield, Samuel Alizon
Published 2017-05-01

The evolutionary dynamics of a rapidly mutating virus within and between hosts: the case of hepatitis C virus.

by Fabio Luciani, Samuel Alizon
Published 2009-11-01

Modelling the Course of an HIV Infection: Insights from Ecology and Evolution

by Carsten Magnus, Samuel Alizon
Published 2012-10-01

Reconciling Pasteur and Darwin to control infectious diseases.

by Samuel Alizon, Pierre-Olivier Méthot
Published 2018-01-01

Inferring epidemiological parameters from phylogenies using regression-ABC: A comparative study.

by Emma Saulnier, Olivier Gascuel, Samuel Alizon
Published 2017-03-01

Predicting COVID-19 incidence in French hospitals using human contact network analytics

by Christian Selinger, Marc Choisy, Samuel Alizon
Published 2021-10-01

Epidemic spread on weighted networks.

by Christel Kamp, Mathieu Moslonka-Lefebvre, Samuel Alizon
Published 2013-01-01

Why Human Papillomavirus Acute Infections Matter

by Samuel Alizon, Carmen Lía Murall, Ignacio G. Bravo
Published 2017-10-01

Age-structured non-pharmaceutical interventions for optimal control of COVID-19 epidemic.

by Quentin Richard, Samuel Alizon, Marc Choisy, Mircea T Sofonea, Ramsès Djidjou-Demasse
Published 2021-03-01

Epithelial stratification shapes infection dynamics.

by Carmen Lía Murall, Robert Jackson, Ingeborg Zehbe, Nathalie Boulle, Michel Segondy, Samuel Alizon
Published 2019-01-01

Memory is key in capturing COVID-19 epidemiological dynamics

by Mircea T. Sofonea, Bastien Reyné, Baptiste Elie, Ramsès Djidjou-Demasse, Christian Selinger, Yannis Michalakis, Samuel Alizon
Published 2021-06-01

Detecting Rapid Spread of SARS-CoV-2 Variants, France, January 26–February 16, 2021

by Stéphanie Haim-Boukobza, Bénédicte Roquebert, Sabine Trombert-Paolantoni, Emmanuel Lecorche, Laura Verdurme, Vincent Foulongne, Christian Selinger, Yannis Michalakis, Mircea T. Sofonea, Samuel Alizon
Published 2021-05-01

Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load.

by Samuel Alizon, Viktor von Wyl, Tanja Stadler, Roger D Kouyos, Sabine Yerly, Bernard Hirschel, Jürg Böni, Cyril Shah, Thomas Klimkait, Hansjakob Furrer, Andri Rauch, Pietro L Vernazza, Enos Bernasconi, Manuel Battegay, Philippe Bürgisser, Amalio Telenti, Huldrych F Günthard, Sebastian Bonhoeffer, Swiss HIV Cohort Study
Published 2010-09-01