The accuracy, feasibility and challenges of sequencing short tandem repeats using next-generation sequencing platforms.

by Monika Zavodna, Andrew Bagshaw, Rudiger Brauning, Neil J Gemmell
Published 2014-01-01

Genome-wide DNA methylation patterns and transcription analysis in sheep muscle.

by Christine Couldrey, Rudiger Brauning, Jeremy Bracegirdle, Paul Maclean, Harold V Henderson, John C McEwan
Published 2014-01-01

Population Connectivity and Traces of Mitochondrial Introgression in New Zealand Black-Billed Gulls (<i>Larus bulleri</i>)

by Claudia Mischler, Andrew Veale, Tracey van Stijn, Rudiger Brauning, John C. McEwan, Richard Maloney, Bruce C. Robertson
Published 2018-11-01

The Use of “Genotyping-by-Sequencing” to Recover Shared Genealogy in Genetically Diverse <i>Eucalyptus</i> Populations

by Jaroslav Klápště, Rachael L. Ashby, Emily J. Telfer, Natalie J. Graham, Heidi S. Dungey, Rudiger Brauning, Shannon M. Clarke, Ken G. Dodds
Published 2021-07-01

Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

by Vincent Prieur, Shannon M. Clarke, Luiz F. Brito, John C. McEwan, Michael A. Lee, Rudiger Brauning, Ken G. Dodds, Benoît Auvray
Published 2017-07-01

Exclusion and Genomic Relatedness Methods for Assignment of Parentage Using Genotyping-by-Sequencing Data

by Ken G. Dodds, John C. McEwan, Rudiger Brauning, Tracey C. van Stijn, Suzanne J. Rowe, K. Mary McEwan, Shannon M. Clarke
Published 2019-10-01

Application of Low Coverage Genotyping by Sequencing in Selectively Bred Arctic Charr (Salvelinus alpinus)

by Christos Palaiokostas, Shannon M. Clarke, Henrik Jeuthe, Rudiger Brauning, Timothy P. Bilton, Ken G. Dodds, John C. McEwan, Dirk-Jan De Koning
Published 2020-06-01

Breeding Low Emitting Ruminants: Predicting Methane from Microbes

by Suzanne J. Rowe, Melanie Hess, Larissa Zetouni, Sharon Hickey, Rudiger Brauning, Hannah Henry, Holly Flay, Juliana Budel, Brooke Bryson, Peter Janssen, Arjan Jonker, John McEwan
Published 2020-04-01

Whole Genome Sequencing for Determining the Source of Mycobacterium bovis Infections in Livestock Herds and Wildlife in New Zealand

by Marian Price-Carter, Rudiger Brauning, Geoffrey W. de Lisle, Paul Livingstone, Mark Neill, Jane Sinclair, Brent Paterson, Gillian Atkinson, Garry Knowles, Kevin Crews, Joseph Crispell, Rowland Kao, Suelee Robbe-Austerman, Tod Stuber, Julian Parkhill, James Wood, Simon Harris, Desmond M. Collins
Published 2018-10-01

A restriction enzyme reduced representation sequencing approach for low-cost, high-throughput metagenome profiling.

by Melanie K Hess, Suzanne J Rowe, Tracey C Van Stijn, Hannah M Henry, Sharon M Hickey, Rudiger Brauning, Alan F McCulloch, Andrew S Hess, Michelle R Kirk, Sandeep Kumar, Cesar Pinares-Patiño, Sandra Kittelmann, Graham R Wood, Peter H Janssen, John C McEwan
Published 2020-01-01

Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds

by Marina Naval-Sanchez, Quan Nguyen, Sean McWilliam, Laercio R. Porto-Neto, Ross Tellam, Tony Vuocolo, Antonio Reverter, Miguel Perez-Enciso, Rudiger Brauning, Shannon Clarke, Alan McCulloch, Wahid Zamani, Saeid Naderi, Hamid Reza Rezaei, Francois Pompanon, Pierre Taberlet, Kim C. Worley, Richard A. Gibbs, Donna M. Muzny, Shalini N. Jhangiani, Noelle Cockett, Hans Daetwyler, James Kijas
Published 2018-02-01