Single-step selection of bivalent aptamers validated by comparison with SELEX using high-throughput sequencing.

by Robert Wilson, Christian Bourne, Roy R Chaudhuri, Richard Gregory, John Kenny, Andrew Cossins
Published 2014-01-01

Genome-wide high-throughput screening to investigate essential genes involved in methicillin-resistant Staphylococcus aureus Sequence Type 398 survival.

by Mette T Christiansen, Rolf S Kaas, Roy R Chaudhuri, Mark A Holmes, Henrik Hasman, Frank M Aarestrup
Published 2014-01-01

Retrospective application of transposon-directed insertion-site sequencing to investigate niche-specific virulence of Salmonella Typhimurium in cattle

by Prerna Vohra, Roy R. Chaudhuri, Matthew Mayho, Christina Vrettou, Cosmin Chintoan-Uta, Nicholas R. Thomson, Jayne C. Hope, John Hopkins, Mark P. Stevens
Published 2019-01-01

The fitness landscape of the African Salmonella Typhimurium ST313 strain D23580 reveals unique properties of the pBT1 plasmid.

by Rocío Canals, Roy R Chaudhuri, Rebecca E Steiner, Siân V Owen, Natalia Quinones-Olvera, Melita A Gordon, Michael Baym, Michael Ibba, Jay C D Hinton
Published 2019-09-01

Architecture and Self-Assembly of Clostridium sporogenes and Clostridium botulinum Spore Surfaces Illustrate a General Protective Strategy across Spore Formers

by Thamarai K. Janganan, Nic Mullin, Ainhoa Dafis-Sagarmendi, Jason Brunt, Svetomir B. Tzokov, Sandra Stringer, Anne Moir, Roy R. Chaudhuri, Robert P. Fagan, Jamie K. Hobbs, Per A. Bullough
Published 2020-07-01

ICEApl1, an integrative conjugative element related to ICEHin1056, identified in the pig pathogen Actinobacillus pleuropneumoniae

by Janine T Bosse, Yanwen Li, Roberto Fernandez Crespo, Roy R Chaudhuri, Jon Rogers, Matthew T G Holden, Duncan Maskell, Alexander W Tucker, Brendan W Wren, Andrew N Rycroft, Paul R Langford
Published 2016-06-01

Transcriptome and proteome analysis of Salmonella enterica serovar Typhimurium systemic infection of wild type and immune-deficient mice.

by Olusegun Oshota, Max Conway, Maria Fookes, Fernanda Schreiber, Roy R Chaudhuri, Lu Yu, Fiona J E Morgan, Simon Clare, Jyoti Choudhary, Nicholas R Thomson, Pietro Lio, Duncan J Maskell, Pietro Mastroeni, Andrew J Grant
Published 2017-01-01

Comprehensive identification of Salmonella enterica serovar typhimurium genes required for infection of BALB/c mice.

by Roy R Chaudhuri, Sarah E Peters, Stephen J Pleasance, Helen Northen, Chrissie Willers, Gavin K Paterson, Danielle B Cone, Andrew G Allen, Paul J Owen, Gil Shalom, Dov J Stekel, Ian G Charles, Duncan J Maskell
Published 2009-07-01

Genome sequencing shows that European isolates of Francisella tularensis subspecies tularensis are almost identical to US laboratory strain Schu S4.

by Roy R Chaudhuri, Chuan-Peng Ren, Leah Desmond, Gemma A Vincent, Nigel J Silman, John K Brehm, Michael J Elmore, Michael J Hudson, Mats Forsman, Karen E Isherwood, Darina Gurycová, Nigel P Minton, Richard W Titball, Mark J Pallen, Richard Vipond
Published 2007-04-01

Whole genome investigation of a divergent clade of the pathogen Streptococcus suis

by Abiyad eBaig, Lucy A Weinert, Sarah E Peters, Kate J Howell, Roy R Chaudhuri, Jinhong eWang, Matthew T.G. Holden, Julian eParkhill, Paul eLangford, Andrew eRycroft, Brendan W Wren, Alexander W Tucker, Duncan J Maskell
Published 2015-11-01

Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture

by Rachel Gilroy, Anuradha Ravi, Maria Getino, Isabella Pursley, Daniel L. Horton, Nabil-Fareed Alikhan, Dave Baker, Karim Gharbi, Neil Hall, Mick Watson, Evelien M. Adriaenssens, Ebenezer Foster-Nyarko, Sheikh Jarju, Arss Secka, Martin Antonio, Aharon Oren, Roy R. Chaudhuri, Roberto La Ragione, Falk Hildebrand, Mark J. Pallen
Published 2021-04-01

Adding function to the genome of African Salmonella Typhimurium ST313 strain D23580.

by Rocío Canals, Disa L Hammarlöf, Carsten Kröger, Siân V Owen, Wai Yee Fong, Lizeth Lacharme-Lora, Xiaojun Zhu, Nicolas Wenner, Sarah E Carden, Jared Honeycutt, Denise M Monack, Robert A Kingsley, Philip Brownridge, Roy R Chaudhuri, Will P M Rowe, Alexander V Predeus, Karsten Hokamp, Melita A Gordon, Jay C D Hinton
Published 2019-01-01

Comprehensive assignment of roles for Salmonella typhimurium genes in intestinal colonization of food-producing animals.

by Roy R Chaudhuri, Eirwen Morgan, Sarah E Peters, Stephen J Pleasance, Debra L Hudson, Holly M Davies, Jinhong Wang, Pauline M van Diemen, Anthony M Buckley, Alison J Bowen, Gillian D Pullinger, Daniel J Turner, Gemma C Langridge, A Keith Turner, Julian Parkhill, Ian G Charles, Duncan J Maskell, Mark P Stevens
Published 2013-04-01

Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042.

by Roy R Chaudhuri, Mohammed Sebaihia, Jon L Hobman, Mark A Webber, Denisse L Leyton, Martin D Goldberg, Adam F Cunningham, Anthony Scott-Tucker, Paul R Ferguson, Christopher M Thomas, Gad Frankel, Christoph M Tang, Edward G Dudley, Ian S Roberts, David A Rasko, Mark J Pallen, Julian Parkhill, James P Nataro, Nicholas R Thomson, Ian R Henderson
Published 2010-01-01

Publisher Correction: Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis

by Lucy A. Weinert, Roy R. Chaudhuri, Jinhong Wang, Sarah E. Peters, Jukka Corander, Thibaut Jombart, Abiyad Baig, Kate J. Howell, Minna Vehkala, Niko Välimäki, David Harris, Tran Thi Bich Chieu, Nguyen Van Vinh Chau, James Campbell, Constance Schultsz, Julian Parkhill, Stephen D. Bentley, Paul R. Langford, Andrew N. Rycroft, Brendan W. Wren, Jeremy Farrar, Stephen Baker, Ngo Thi Hoa, Matthew T. G. Holden, Alexander W. Tucker, Duncan J. Maskell, BRaDP1T Consortium
Published 2019-11-01