Solving the problem of comparing whole bacterial genomes across different sequencing platforms.

by Rolf S Kaas, Pimlapas Leekitcharoenphon, Frank M Aarestrup, Ole Lund
Published 2014-01-01

Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica.

by Pimlapas Leekitcharoenphon, Eva M Nielsen, Rolf S Kaas, Ole Lund, Frank M Aarestrup
Published 2014-01-01

Genome-wide high-throughput screening to investigate essential genes involved in methicillin-resistant Staphylococcus aureus Sequence Type 398 survival.

by Mette T Christiansen, Rolf S Kaas, Roy R Chaudhuri, Mark A Holmes, Henrik Hasman, Frank M Aarestrup
Published 2014-01-01

Characterization and Genetic Variation of Vibrio cholerae Isolated from Clinical and Environmental Sources in Thailand.

by Achiraya Siriphap, Pimlapas Leekitcharoenphon, Rolf S Kaas, Chonchanok Theethakaew, Frank M Aarestrup, Orasa Sutheinkul, Rene S Hendriksen
Published 2017-01-01

The Lake Chad Basin, an Isolated and Persistent Reservoir of Vibrio cholerae O1: A Genomic Insight into the Outbreak in Cameroon, 2010.

by Rolf S Kaas, Antoinette Ngandjio, Ariane Nzouankeu, Achiraya Siriphap, Marie-Christine Fonkoua, Frank M Aarestrup, Rene S Hendriksen
Published 2016-01-01

Is the Evolution of Salmonella enterica subsp. enterica Linked to Restriction-Modification Systems?

by Louise Roer, Rene S. Hendriksen, Pimlapas Leekitcharoenphon, Oksana Lukjancenko, Rolf Sommer Kaas, Henrik Hasman, Frank M. Aarestrup, Jonathan Eisen
Published 2016-06-01

Fatal Septicemia Linked to Transmission of MRSA Clonal Complex 398 in Hospital and Nursing Home, Denmark

by Rikke Thoft Nielsen, Michael Kemp, Anette Holm, Marianne Nielsine Skov, Mette Detlefsen, Henrik Hasman, Frank Møller Aarestrup, Rolf Sommer Kaas, Jesper Boye Nielsen, Henrik Westh, Hans Jørn Kolmos
Published 2016-05-01

An Assessment of Different Genomic Approaches for Inferring Phylogeny of Listeria monocytogenes

by Clémentine Henri, Pimlapas Leekitcharoenphon, Heather A. Carleton, Nicolas Radomski, Rolf S. Kaas, Jean-François Mariet, Arnaud Felten, Frank M. Aarestrup, Peter Gerner Smidt, Sophie Roussel, Laurent Guillier, Michel-Yves Mistou, René S. Hendriksen
Published 2017-11-01

Addressing Learning Needs on the Use of Metagenomics in Antimicrobial Resistance Surveillance

by Ana Sofia Ribeiro Duarte, Katharina D. C. Stärk, Patrick Munk, Pimlapas Leekitcharoenphon, Alex Bossers, Alex Bossers, Roosmarijn Luiken, Steven Sarrazin, Oksana Lukjancenko, Sünje Johanna Pamp, Valeria Bortolaia, Jakob Nybo Nissen, Philipp Kirstahler, Liese Van Gompel, Casper Sahl Poulsen, Rolf Sommer Kaas, Maria Hellmér, Rasmus Borup Hansen, Violeta Munoz Gomez, Tine Hald
Published 2020-02-01

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

by Rene S. Hendriksen, Patrick Munk, Patrick Njage, Bram van Bunnik, Luke McNally, Oksana Lukjancenko, Timo Röder, David Nieuwenhuijse, Susanne Karlsmose Pedersen, Jette Kjeldgaard, Rolf S. Kaas, Philip Thomas Lanken Conradsen Clausen, Josef Korbinian Vogt, Pimlapas Leekitcharoenphon, Milou G. M. van de Schans, Tina Zuidema, Ana Maria de Roda Husman, Simon Rasmussen, Bent Petersen, The Global Sewage Surveillance project consortium, Clara Amid, Guy Cochrane, Thomas Sicheritz-Ponten, Heike Schmitt, Jorge Raul Matheu Alvarez, Awa Aidara-Kane, Sünje J. Pamp, Ole Lund, Tine Hald, Mark Woolhouse, Marion P. Koopmans, Håkan Vigre, Thomas Nordahl Petersen, Frank M. Aarestrup
Published 2019-03-01