SplinectomeR Enables Group Comparisons in Longitudinal Microbiome Studies

by Robin R. Shields-Cutler, Gabe A. Al-Ghalith, Moran Yassour, Moran Yassour, Dan Knights, Dan Knights
Published 2018-04-01

Evaluating the Information Content of Shallow Shotgun Metagenomics

by Benjamin Hillmann, Gabriel A. Al-Ghalith, Robin R. Shields-Cutler, Qiyun Zhu, Daryl M. Gohl, Kenneth B. Beckman, Rob Knight, Dan Knights
Published 2018-11-01

Wild primate microbiomes prevent weight gain in germ-free mice

by Dimitrios N. Sidiropoulos, Gabriel A. Al-Ghalith, Robin R. Shields-Cutler, Tonya L. Ward, Abigail J. Johnson, Pajau Vangay, Dan Knights, Purna C. Kashyap, Yibo Xian, Amanda E. Ramer-Tait, Jonathan B. Clayton
Published 2020-05-01

Early E. casseliflavus gut colonization and outcomes of allogeneic hematopoietic cell transplantation.

by Armin Rashidi, Maryam Ebadi, Robin R Shields-Cutler, Kathryn Kruziki, Dawn A Manias, Aaron M T Barnes, Todd E DeFor, Patricia Ferrieri, Jo-Anne H Young, Dan Knights, Bruce R Blazar, Daniel J Weisdorf, Gary M Dunny
Published 2019-01-01

Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders

by George B. Saffouri, Robin R. Shields-Cutler, Jun Chen, Yi Yang, Heather R. Lekatz, Vanessa L. Hale, Janice M. Cho, Eric J. Battaglioli, Yogesh Bhattarai, Kevin J. Thompson, Krishna K. Kalari, Gaurav Behera, Jonathan C. Berry, Stephanie A. Peters, Robin Patel, Audrey N. Schuetz, Jeremiah J. Faith, Michael Camilleri, Justin L. Sonnenburg, Gianrico Farrugia, Jonathan R. Swann, Madhusudan Grover, Dan Knights, Purna C. Kashyap
Published 2019-05-01

Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity

by Xue-Song Zhang, Jackie Li, Kimberly A Krautkramer, Michelle Badri, Thomas Battaglia, Timothy C Borbet, Hyunwook Koh, Sandy Ng, Rachel A Sibley, Yuanyuan Li, Wimal Pathmasiri, Shawn Jindal, Robin R Shields-Cutler, Ben Hillmann, Gabriel A Al-Ghalith, Victoria E Ruiz, Alexandra Livanos, Angélique B van ‘t Wout, Nabeetha Nagalingam, Arlin B Rogers, Susan Jenkins Sumner, Dan Knights, John M Denu, Huilin Li, Kelly V Ruggles, Richard Bonneau, R Anthony Williamson, Marcus Rauch, Martin J Blaser
Published 2018-07-01