SLEPR: a sample-level enrichment-based pathway ranking method -- seeking biological themes through pathway-level consistency.

by Ming Yi, Robert M Stephens
Published 2008-09-01

GradientScanSurv-An exhaustive association test method for gene expression data with censored survival outcome.

by Ming Yi, Ruoqing Zhu, Robert M Stephens
Published 2018-01-01

Tumor RAS Gene Expression Levels Are Influenced by the Mutational Status of RAS Genes and Both Upstream and Downstream RAS Pathway Genes

by Robert M Stephens, Ming Yi, Bailey Kessing, Dwight V Nissley, Frank McCormick
Published 2017-06-01

Knowledge and theme discovery across very large biological data sets using distributed queries: a prototype combining unstructured and structured data.

by Uma S Mudunuri, Mohamad Khouja, Stephen Repetski, Girish Venkataraman, Anney Che, Brian T Luke, F Pascal Girard, Robert M Stephens
Published 2013-01-01

Reconciling apparent conflicts between mitochondrial and nuclear phylogenies in African elephants.

by Yasuko Ishida, Taras K Oleksyk, Nicholas J Georgiadis, Victor A David, Kai Zhao, Robert M Stephens, Sergios-Orestis Kolokotronis, Alfred L Roca
Published 2011-01-01

Differences in the tumor microenvironment between African-American and European-American breast cancer patients.

by Damali N Martin, Brenda J Boersma, Ming Yi, Mark Reimers, Tiffany M Howe, Harry G Yfantis, Yien Che Tsai, Erica H Williams, Dong H Lee, Robert M Stephens, Allan M Weissman, Stefan Ambs
Published 2009-01-01

Pathway-specific engineered mouse allograft models functionally recapitulate human serous epithelial ovarian cancer.

by Ludmila Szabova, Sujata Bupp, Muhaymin Kamal, Deborah B Householder, Lidia Hernandez, Jerome J Schlomer, Maureen L Baran, Ming Yi, Robert M Stephens, Christina M Annunziata, Philip L Martin, Terry A Van Dyke, Zoe Weaver Ohler, Simone Difilippantonio
Published 2014-01-01

Guanine holes are prominent targets for mutation in cancer and inherited disease.

by Albino Bacolla, Nuri A Temiz, Ming Yi, Joseph Ivanic, Regina Z Cer, Duncan E Donohue, Edward V Ball, Uma S Mudunuri, Guliang Wang, Aklank Jain, Natalia Volfovsky, Brian T Luke, Robert M Stephens, David N Cooper, Jack R Collins, Karen M Vasquez
Published 2013-01-01