Identification of endometrial cancer methylation features using combined methylation analysis methods.

by Michael P Trimarchi, Pearlly Yan, Joanna Groden, Ralf Bundschuh, Paul J Goodfellow
Published 2017-01-01

SMaSH: Sample matching using SNPs in humans

by Maximillian Westphal, David Frankhouser, Carmine Sonzone, Peter G. Shields, Pearlly Yan, Ralf Bundschuh
Published 2019-12-01

Gamma-Normal-Gamma Mixture Model for Detecting Differentially Methylated Loci in Three Breast Cancer Cell Lines

by Joe Gray, Tim Huang, Shili Lin, Pearlly Yan, Lang Li, Abbas Khalili, Dustin Potter
Published 2007-01-01

Gamma-Normal-Gamma Mixture Model for Detecting Differentially Methylated Loci in Three Breast Cancer Cell Lines

by Abbas Khalili, Dustin Potter, Pearlly Yan, Lang Li, Joe Gray, Tim Huang, Shili Lin Ph.D.
Published 2007-01-01

Correlation of Klebsiella pneumoniae comparative genetic analyses with virulence profiles in a murine respiratory disease model.

by Ramy A Fodah, Jacob B Scott, Hok-Hei Tam, Pearlly Yan, Tia L Pfeffer, Ralf Bundschuh, Jonathan M Warawa
Published 2014-01-01

HOXB13, a target of DNMT3B, is methylated at an upstream CpG island, and functions as a tumor suppressor in primary colorectal tumors.

by Kalpana Ghoshal, Tasneem Motiwala, Rainer Claus, Pearlly Yan, Huban Kutay, Jharna Datta, Sarmila Majumder, Shoumei Bai, Arnab Majumder, Tim Huang, Christoph Plass, Samson T Jacob
Published 2010-04-01

Transcriptome analysis discloses dysregulated genes in normal appearing tumor-adjacent thyroid tissues from patients with papillary thyroid carcinoma

by Huiling He, Sandya Liyanarachchi, Wei Li, Daniel F. Comiskey, Pearlly Yan, Ralf Bundschuh, Altan M. Turkoglu, Pamela Brock, Matthew D. Ringel, Albert de la Chapelle
Published 2021-07-01

Quality Control for RNA-Seq (QuaCRS): An Integrated Quality Control Pipeline

by Karl W. Kroll, Nima E. Mokaram, Alexander R. Pelletier, David E. Frankhouser, Maximillian S. Westphal, Paige A. Stump, Cameron L. Stump, Ralf Bundschuh, James S. Blachly, Pearlly Yan
Published 2014-10-01

Quality Control for RNA-Seq (QuaCRS): An Integrated Quality Control Pipeline

by Karl W. Kroll, Nima E. Mokaram, Alexander R. Pelletier, David E. Frankhouser, Maximillian S. Westphal, Paige A. Stump, Cameron L. Stump, Ralf Bundschuh, James S. Blachly, Pearlly Yan
Published 2014-01-01

CLEAR: coverage-based limiting-cell experiment analysis for RNA-seq

by Logan A. Walker, Michael G. Sovic, Chi-Ling Chiang, Eileen Hu, Jiyeon K. Denninger, Xi Chen, Elizabeth D. Kirby, John C. Byrd, Natarajan Muthusamy, Ralf Bundschuh, Pearlly Yan
Published 2020-02-01