Use of low-coverage, large-insert, short-read data for rapid and accurate generation of enhanced-quality draft Pseudomonas genome sequences.

by Heath E O'Brien, Yunchen Gong, Pauline Fung, Pauline W Wang, David S Guttman
Published 2011-01-01

Recombination of ecologically and evolutionarily significant loci maintains genetic cohesion in the Pseudomonas syringae species complex

by Marcus M. Dillon, Shalabh Thakur, Renan N. D. Almeida, Pauline W. Wang, Bevan S. Weir, David S. Guttman
Published 2019-01-01

Mycobiome Sequencing and Analysis Applied to Fungal Community Profiling of the Lower Respiratory Tract During Fungal Pathogenesis

by Lisa R. McTaggart, Julia K. Copeland, Anuradha Surendra, Pauline W. Wang, Pauline W. Wang, Shahid Husain, Shahid Husain, Bryan Coburn, Bryan Coburn, Bryan Coburn, David S. Guttman, David S. Guttman, Julianne V. Kus, Julianne V. Kus
Published 2019-03-01

Design and application of a novel two-amplicon approach for defining eukaryotic microbiota

by Ana Popovic, Celine Bourdon, Pauline W. Wang, David S. Guttman, Wieger Voskuijl, Michael E. Grigg, Robert H. J. Bandsma, John Parkinson
Published 2018-12-01

Evaluation of digital dispense-assisted broth microdilution antimicrobial susceptibility testing for Pseudomonas aeruginosa isolates

by Shawn T. Clark, Patrick J. Stapleton, Pauline W. Wang, Yvonne C. W. Yau, Valerie J. Waters, David M. Hwang, David S. Guttman
Published 2021-04-01

Accumulation of genetic variants associated with immunity in the selective breeding of broilers

by Angela Zou, Kerry Nadeau, Pauline W. Wang, Jee Yeon Lee, David S. Guttman, Shayan Sharif, Doug R. Korver, John H. Brumell, John Parkinson
Published 2020-01-01

Chloroplast sequence variation and the efficacy of peptide nucleic acids for blocking host amplification in plant microbiome studies

by Connor R. Fitzpatrick, Patricia Lu-Irving, Julia Copeland, David S. Guttman, Pauline W. Wang, David A. Baltrus, Katrina M. Dlugosch, Marc T. J. Johnson
Published 2018-08-01

The Impact of Migration on the Gut Metagenome of South Asian Canadians

by Julia K. Copeland, Gary Chao, Shelley Vanderhout, Erica Acton, Pauline W. Wang, Eric I. Benchimol, Ahmed El-Sohemy, Ken Croitoru, Jennifer L. Gommerman, David S. Guttman, the GEMINI Research Team
Published 2021-01-01

A genome-wide association analysis reveals a potential role for recombination in the evolution of antimicrobial resistance in Burkholderia multivorans.

by Julio Diaz Caballero, Shawn T Clark, Pauline W Wang, Sylva L Donaldson, Bryan Coburn, D Elizabeth Tullis, Yvonne C W Yau, Valerie J Waters, David M Hwang, David S Guttman
Published 2018-12-01

Pulmonary Bacterial Communities in Surgically Resected Noncystic Fibrosis Bronchiectasis Lungs Are Similar to Those in Cystic Fibrosis

by Heather Maughan, Kristopher S. Cunningham, Pauline W. Wang, Yu Zhang, Marcelo Cypel, Cecilia Chaparro, D. Elizabeth Tullis, Thomas K. Waddell, Shaf Keshavjee, Mingyao Liu, David S. Guttman, David M. Hwang
Published 2012-01-01

Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation.

by Sang Hu Kim, Shawn T Clark, Anuradha Surendra, Julia K Copeland, Pauline W Wang, Ron Ammar, Cathy Collins, D Elizabeth Tullis, Corey Nislow, David M Hwang, David S Guttman, Leah E Cowen
Published 2015-11-01

Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum

by Lauren LeMay-Nedjelski, James Butcher, Sylvia H. Ley, Michelle R. Asbury, Anthony J. Hanley, Alex Kiss, Sharon Unger, Julia K. Copeland, Pauline W. Wang, Bernard Zinman, Alain Stintzi, Deborah L. O’Connor
Published 2020-07-01

A bacterial acetyltransferase destroys plant microtubule networks and blocks secretion.

by Amy Huei-Yi Lee, Brenden Hurley, Corinna Felsensteiner, Carmen Yea, Wenzislava Ckurshumova, Verena Bartetzko, Pauline W Wang, Van Quach, Jennifer D Lewis, Yulu C Liu, Frederik Börnke, Stephane Angers, Andrew Wilde, David S Guttman, Darrell Desveaux
Published 2012-02-01

Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions.

by Heather Maughan, Pauline W Wang, Julio Diaz Caballero, Pauline Fung, Yunchen Gong, Sylva L Donaldson, Lijie Yuan, Shaf Keshavjee, Yu Zhang, Yvonne C W Yau, Valerie J Waters, D Elizabeth Tullis, David M Hwang, David S Guttman
Published 2012-01-01

Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease.

by Honour C McCann, Erik H A Rikkerink, Frederic Bertels, Mark Fiers, Ashley Lu, Jonathan Rees-George, Mark T Andersen, Andrew P Gleave, Bernhard Haubold, Mark W Wohlers, David S Guttman, Pauline W Wang, Christina Straub, Joel L Vanneste, Paul B Rainey, Matthew D Templeton
Published 2013-01-01

Correction: Genomic Analysis of the Kiwifruit Pathogen pv. Provides Insight into the Origins of an Emergent Plant Disease.

by Honour C. McCann, Erik H. A. Rikkerink, Frederic Bertels, Mark Fiers, Ashley Lu, Jonathan Rees-George, Mark T. Andersen, Andrew P. Gleave, Bernhard Haubold, Mark W. Wohlers, David S. Guttman, Pauline W. Wang, Christina Straub, Joel L. Vanneste, Paul B. Rainey, Matthew D. Templeton
Published 2013-09-01

Identifying Pseudomonas syringae Type III Secreted Effector Function via a Yeast Genomic Screen

by Amy Huei-Yi Lee, D. Patrick Bastedo, Ji-Young Youn, Timothy Lo, Maggie A. Middleton, Inga Kireeva, Jee Yeon Lee, Sara Sharifpoor, Anastasia Baryshnikova, Jianfeng Zhang, Pauline W. Wang, Sergio G. Peisajovich, Michael Constanzo, Brenda J. Andrews, Charles M. Boone, Darrell Desveaux, David S. Guttman
Published 2019-02-01