Statistical Binning for Barcoded Reads Improves Downstream Analyses

by Shajii, Ariya, Numanagic, Ibrahim, Whelan, Christopher, Berger Leighton, Bonnie
Published 2019

A Python-based programming language for high-performance computational genomics

by Shajii, Ariya, Numanagić, Ibrahim, Leighton, Alexander T., Greenyer, Haley, Amarasinghe, Saman, Berger, Bonnie
Published 2022

A Python-based programming language for high-performance computational genomics

by Shajii, Ariya, Numanagić, Ibrahim, Leighton, Alexander T, Greenyer, Haley, Amarasinghe, Saman, Berger, Bonnie
Published 2022

Fast characterization of segmental duplications in genome assemblies

by Numanagic, Ibrahim, Gokkaya, Alim S., Zhang, Lillian, Berger Leighton, Bonnie, Alkan, Can, Hach, Faraz
Published 2019

Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes

by Malikić, Salem, Ford, Michael, Qin, Xiang, Toji, Lorraine, Radovich, Milan, Skaar, Todd C., Pratt, Victoria M., Scherer, Steve, Sahinalp, S. Cenk, Numanagic, Ibrahim, Berger Leighton, Bonnie
Published 2018