G1/S cell cycle regulators mediate effects of circadian dysregulation on tumor growth and provide targets for timed anticancer treatment.

by Yool Lee, Nicholas F Lahens, Shirley Zhang, Joseph Bedont, Jeffrey M Field, Amita Sehgal
Published 2019-04-01

Comparative evaluation of full-length isoform quantification from RNA-Seq

by Dimitra Sarantopoulou, Thomas G. Brooks, Soumyashant Nayak, Antonijo Mrčela, Nicholas F. Lahens, Gregory R. Grant
Published 2021-05-01

A circadian clock regulates efflux by the blood-brain barrier in mice and human cells

by Shirley L. Zhang, Nicholas F. Lahens, Zhifeng Yue, Denice M. Arnold, Peter P. Pakstis, Jessica E. Schwarz, Amita Sehgal
Published 2021-01-01

A new view of transcriptome complexity and regulation through the lens of local splicing variations

by Jorge Vaquero-Garcia, Alejandro Barrera, Matthew R Gazzara, Juan González-Vallinas, Nicholas F Lahens, John B Hogenesch, Kristen W Lynch, Yoseph Barash
Published 2016-02-01

Dietary challenges differentially affect activity and sleep/wake behavior in mus musculus: Isolating independent associations with diet/energy balance and body weight.

by Isaac J Perron, Brendan T Keenan, Karthikeyani Chellappa, Nicholas F Lahens, Nicole L Yohn, Keith R Shockley, Allan I Pack, Sigrid C Veasey
Published 2018-01-01

MOCCASIN: a method for correcting for known and unknown confounders in RNA splicing analysis

by Barry Slaff, Caleb M. Radens, Paul Jewell, Anupama Jha, Nicholas F. Lahens, Gregory R. Grant, Andrei Thomas-Tikhonenko, Kristen W. Lynch, Yoseph Barash
Published 2021-06-01

A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression

by Nicholas F. Lahens, Emanuela Ricciotti, Olga Smirnova, Erik Toorens, Eun Ji Kim, Giacomo Baruzzo, Katharina E. Hayer, Tapan Ganguly, Jonathan Schug, Gregory R. Grant
Published 2017-08-01

CAMPAREE: a robust and configurable RNA expression simulator

by Nicholas F. Lahens, Thomas G. Brooks, Dimitra Sarantopoulou, Soumyashant Nayak, Cris Lawrence, Antonijo Mrčela, Anand Srinivasan, Jonathan Schug, John B. Hogenesch, Yoseph Barash, Gregory R. Grant
Published 2021-09-01

Transcriptional profiling reveals extraordinary diversity among skeletal muscle tissues

by Erin E Terry, Xiping Zhang, Christy Hoffmann, Laura D Hughes, Scott A Lewis, Jiajia Li, Matthew J Wallace, Lance A Riley, Collin M Douglas, Miguel A Gutierrez-Monreal, Nicholas F Lahens, Ming C Gong, Francisco Andrade, Karyn A Esser, Michael E Hughes
Published 2018-05-01