Deepprune: Learning Efficient and Interpretable Convolutional Networks Through Weight Pruning for Predicting DNA-Protein Binding

by Xiao Luo, Weilai Chi, Minghua Deng, Minghua Deng
Published 2019-11-01

Single-Cell Transcriptome Data Clustering via Multinomial Modeling and Adaptive Fuzzy K-Means Algorithm

by Liang Chen, Weinan Wang, Yuyao Zhai, Minghua Deng, Minghua Deng
Published 2020-04-01

Direct interaction network and differential network inference from compositional data via lasso penalized D-trace loss.

by Shun He, Minghua Deng
Published 2019-01-01

Sparsity-Penalized Stacked Denoising Autoencoders for Imputing Single-Cell RNA-Seq Data

by Weilai Chi, Minghua Deng
Published 2020-05-01

Low-Rank and Sparse Matrix Decomposition for Genetic Interaction Data

by Yishu Wang, Dejie Yang, Minghua Deng
Published 2015-01-01

Statistical analysis reveals co-expression patterns of many pairs of genes in yeast are jointly regulated by interacting loci.

by Lin Wang, Wei Zheng, Hongyu Zhao, Minghua Deng
Published 2013-03-01

Integrating phosphorylation network with transcriptional network reveals novel functional relationships.

by Lin Wang, Lin Hou, Minping Qian, Minghua Deng
Published 2012-01-01

RaptorX-Angle: real-value prediction of protein backbone dihedral angles through a hybrid method of clustering and deep learning

by Yujuan Gao, Sheng Wang, Minghua Deng, Jinbo Xu
Published 2018-05-01

Detecting virus integration sites based on multiple related sequencing data by VirTect

by Yuchao Xia, Yun Liu, Minghua Deng, Ruibin Xi
Published 2019-01-01

Yeast cell fate control by temporal redundancy modulation of transcription factor paralogs

by Yan Wu, Jiaqi Wu, Minghua Deng, Yihan Lin
Published 2021-05-01

Integrating Deep Supervised, Self-Supervised and Unsupervised Learning for Single-Cell RNA-seq Clustering and Annotation

by Liang Chen, Yuyao Zhai, Qiuyan He, Weinan Wang, Minghua Deng
Published 2020-07-01

Characterization of the DREBA4-Type Transcription Factor (SlDREBA4), Which Contributes to Heat Tolerance in Tomatoes

by Lianzhen Mao, Minghua Deng, Shurui Jiang, Haishan Zhu, Zhengan Yang, Yanling Yue, Kai Zhao
Published 2020-09-01

IL-4 Alleviates Ischaemia-Reperfusion Injury by Inducing Kupffer Cells M2 Polarization via STAT6-JMJD3 Pathway after Rat Liver Transplantation

by Minghua Deng, Jingyuan Wang, Hao Wu, Menghao Wang, Ding Cao, Jinzheng Li, Yakun Wu, Jianping Gong
Published 2020-01-01

Predicting protein inter-residue contacts using composite likelihood maximization and deep learning

by Haicang Zhang, Qi Zhang, Fusong Ju, Jianwei Zhu, Yujuan Gao, Ziwei Xie, Minghua Deng, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
Published 2019-10-01

Correction to: Predicting protein inter-residue contacts using composite likelihood maximization and deep learning

by Haicang Zhang, Qi Zhang, Fusong Ju, Jianwei Zhu, Yujuan Gao, Ziwei Xie, Minghua Deng, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
Published 2019-11-01

Construction of high-density bin map and QTL mapping of horticultural traits from an interspecific cross between Capsicum annuum and Chinese wild Capsicum frutescens

by Jiaxiang Wei, Jun Li, Jiahong Yu, Yuan Cheng, Meiying Ruan, Qingjing Ye, Zhuping Yao, Rongqing Wang, Guozhi Zhou, Minghua Deng, Hongjian Wan
Published 2020-01-01

Comparative Transcriptome Analysis between Cytoplasmic Male-sterile Line and Its Maintainer During the Floral Bud Development of Pepper

by Junheng Lv, Zhoubin Liu, Yuhua Liu, Lijun Ou, Minghua Deng, Jing Wang, Jingshuang Song, Yanqing Ma, Wenchao Chen, Zhuqing Zhang, Xiongze Dai, Xuexiao Zou
Published 2020-03-01

Sugar transporter proteins in Capsicum: identification, characterization, evolution and expression patterns

by Huawei Wei, Jia Liu, Jiaqiu Zheng, Rong Zhou, Yuan Cheng, Meiying Ruan, Qingjing Ye, Rongqing Wang, Zhuping Yao, Guozhi Zhou, Minghua Deng, Yougen Chen, Hongjian Wan
Published 2020-01-01

Evolutionary Conservation and Expression Patterns of Neutral/Alkaline Invertases in <i>Solanum</i>

by Luzhao Pan, Qinwei Guo, Songlin Chai, Yuan Cheng, Meiying Ruan, Qingjing Ye, Rongqing Wang, Zhuping Yao, Guozhi Zhou, Zhimiao Li, Minghua Deng, Fengmei Jin, Lecheng Liu, Hongjian Wan
Published 2019-11-01

RNA editome in rhesus macaque shaped by purifying selection.

by Jia-Yu Chen, Zhiyu Peng, Rongli Zhang, Xin-Zhuang Yang, Bertrand Chin-Ming Tan, Huaying Fang, Chu-Jun Liu, Mingming Shi, Zhi-Qiang Ye, Yong E Zhang, Minghua Deng, Xiuqin Zhang, Chuan-Yun Li
Published 2014-04-01