Mapping whole genome shotgun sequence and variant calling in mammalian species without their reference genomes [v2; ref status: indexed, http://f1000r.es/2x3]

by Ted Kalbfleisch, Michael P Heaton
Published 2014-02-01

Association of TLR2 haplotypes encoding Q650 with reduced susceptibility to ovine Johne’s disease in Turkish sheep

by Yalçın Yaman, Ramazan Aymaz, Murat Keleş, Veysel Bay, Cemal Ün, Michael P. Heaton
Published 2021-03-01

Using diverse U.S. beef cattle genomes to identify missense mutations in EPAS1, a gene associated with high-altitude pulmonary hypertension [version 1; referees: 2 approved]

by Michael P. Heaton, Timothy P.L. Smith, Jacky K. Carnahan, Veronica Basnayake, Jiansheng Qiu, Barry Simpson, Theodore S. Kalbfleisch
Published 2016-08-01

Using diverse U.S. beef cattle genomes to identify missense mutations in EPAS1, a gene associated with pulmonary hypertension [version 2; referees: 2 approved]

by Michael P. Heaton, Timothy P.L. Smith, Jacky K. Carnahan, Veronica Basnayake, Jiansheng Qiu, Barry Simpson, Theodore S. Kalbfleisch
Published 2016-10-01

Using triallelic SNPs for determining parentage in North American yak (Bos grunniens) and estimating cattle (B. taurus) introgression [version 2; peer review: 2 approved]

by Ted Kalbfleisch, Jessica L. Petersen, R. G. Tait Jr., Jiansheng Qiu, Veronica Basnayake, Peter H. Hackett, Michael P. Heaton
Published 2020-10-01

A SNP resource for studying North American moose [version 1; referees: 2 approved, 1 approved with reservations]

by Theodore S. Kalbfleisch, Brenda M. Murdoch, Timothy P. L. Smith, James D. Murdoch, Michael P. Heaton, Stephanie D. McKay
Published 2018-01-01

Using sheep genomes from diverse U.S. breeds to identify missense variants in genes affecting fecundity [version 1; referees: 2 approved]

by Michael P. Heaton, Timothy P.L. Smith, Bradley A. Freking, Aspen M. Workman, Gary L. Bennett, Jacky K. Carnahan, Theodore S. Kalbfleisch
Published 2017-08-01

A bovine CD18 signal peptide variant with increased binding activity to Mannheimia hemolytica leukotoxin [version 1; referees: 2 approved]

by Aspen M. Workman, Carol G. Chitko-McKown, Timothy P. L. Smith, Gary L. Bennett, Theodore S. Kalbfleisch, Veronica Basnayake, Michael P. Heaton
Published 2018-12-01

Association of a bovine prion gene haplotype with atypical BSE.

by Michael L Clawson, Juergen A Richt, Thierry Baron, Anne-Gaëlle Biacabe, Stefanie Czub, Michael P Heaton, Timothy P L Smith, William W Laegreid
Published 2008-01-01

Genetic testing for TMEM154 mutations associated with lentivirus susceptibility in sheep.

by Michael P Heaton, Theodore S Kalbfleisch, Dustin T Petrik, Barry Simpson, James W Kijas, Michael L Clawson, Carol G Chitko-McKown, Gregory P Harhay, Kreg A Leymaster, International Sheep Genomics Consortium
Published 2013-01-01

Development and characterization of a high density SNP genotyping assay for cattle.

by Lakshmi K Matukumalli, Cynthia T Lawley, Robert D Schnabel, Jeremy F Taylor, Mark F Allan, Michael P Heaton, Jeff O'Connell, Stephen S Moore, Timothy P L Smith, Tad S Sonstegard, Curtis P Van Tassell
Published 2009-01-01

Cardiopulmonary remodeling in fattened beef cattle: a naturally occurring large animal model of obesity-associated pulmonary hypertension with left heart disease

by Greta M. Krafsur, Joseph M. Neary, Franklyn Garry, Timothy Holt, Daniel H. Gould, Gary L. Mason, Milton G. Thomas, R. Mark Enns, Rubin M. Tuder, Michael P. Heaton, R. Dale Brown, Kurt R. Stenmark
Published 2019-01-01

Evaluation of EPAS1 variants for association with bovine congestive heart failure [version 1; peer review: 2 approved]

by Michael P. Heaton, Adam S. Bassett, Katherine J. Whitman, Greta M. Krafsur, Sang In Lee, Jaden M. Carlson, Halden J. Clark, Helen R. Smith, Madeline C. Pelster, Veronica Basnayake, Dale M. Grotelueschen, Brian L. Vander Ley
Published 2019-07-01

SNPs for parentage testing and traceability in globally diverse breeds of sheep.

by Michael P Heaton, Kreg A Leymaster, Theodore S Kalbfleisch, James W Kijas, Shannon M Clarke, John McEwan, Jillian F Maddox, Veronica Basnayake, Dustin T Petrik, Barry Simpson, Timothy P L Smith, Carol G Chitko-McKown, International Sheep Genomics Consortium
Published 2014-01-01

Reduced lentivirus susceptibility in sheep with TMEM154 mutations.

by Michael P Heaton, Michael L Clawson, Carol G Chitko-Mckown, Kreg A Leymaster, Timothy P L Smith, Gregory P Harhay, Stephen N White, Lynn M Herrmann-Hoesing, Michelle R Mousel, Gregory S Lewis, Theodore S Kalbfleisch, James E Keen, William W Laegreid
Published 2012-01-01

A genome wide survey of SNP variation reveals the genetic structure of sheep breeds.

by James W Kijas, David Townley, Brian P Dalrymple, Michael P Heaton, Jillian F Maddox, Annette McGrath, Peter Wilson, Roxann G Ingersoll, Russell McCulloch, Sean McWilliam, Dave Tang, John McEwan, Noelle Cockett, V Hutton Oddy, Frank W Nicholas, Herman Raadsma, International Sheep Genomics Consortium
Published 2009-01-01

Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle

by Wai Yee Low, Rick Tearle, Ruijie Liu, Sergey Koren, Arang Rhie, Derek M. Bickhart, Benjamin D. Rosen, Zev N. Kronenberg, Sarah B. Kingan, Elizabeth Tseng, Françoise Thibaud-Nissen, Fergal J. Martin, Konstantinos Billis, Jay Ghurye, Alex R. Hastie, Joyce Lee, Andy W. C. Pang, Michael P. Heaton, Adam M. Phillippy, Stefan Hiendleder, Timothy P. L. Smith, John L. Williams
Published 2020-04-01

Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle.

by Jared E Decker, Stephanie D McKay, Megan M Rolf, Jaewoo Kim, Antonio Molina Alcalá, Tad S Sonstegard, Olivier Hanotte, Anders Götherström, Christopher M Seabury, Lisa Praharani, Masroor Ellahi Babar, Luciana Correia de Almeida Regitano, Mehmet Ali Yildiz, Michael P Heaton, Wan-Sheng Liu, Chu-Zhao Lei, James M Reecy, Muhammad Saif-Ur-Rehman, Robert D Schnabel, Jeremy F Taylor
Published 2014-03-01