Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations.

by Brian B Tuch, Rebecca R Laborde, Xing Xu, Jian Gu, Christina B Chung, Cinna K Monighetti, Sarah J Stanley, Kerry D Olsen, Jan L Kasperbauer, Eric J Moore, Adam J Broomer, Ruoying Tan, Pius M Brzoska, Matthew W Muller, Asim S Siddiqui, Yan W Asmann, Yongming Sun, Scott Kuersten, Melissa A Barker, Francisco M De La Vega, David I Smith
Published 2010-02-01

RNA-Seq mapping and detection of gene fusions with a suffix array algorithm.

by Onur Sakarya, Heinz Breu, Milan Radovich, Yongzhi Chen, Yulei N Wang, Catalin Barbacioru, Sowmi Utiramerur, Penn P Whitley, Joel P Brockman, Paolo Vatta, Zheng Zhang, Liviu Popescu, Matthew W Muller, Vidya Kudlingar, Nriti Garg, Chieh-Yuan Li, Benjamin S Kong, John P Bodeau, Robert C Nutter, Jian Gu, Kelli S Bramlett, Jeffrey K Ichikawa, Fiona C Hyland, Asim S Siddiqui
Published 2012-01-01