Transcriptome-guided parsimonious flux analysis improves predictions with metabolic networks in complex environments.

by Matthew L Jenior, Thomas J Moutinho, Bonnie V Dougherty, Jason A Papin
Published 2020-04-01

Clostridium difficile Alters the Structure and Metabolism of Distinct Cecal Microbiomes during Initial Infection To Promote Sustained Colonization

by Matthew L. Jenior, Jhansi L. Leslie, Vincent B. Young, Patrick D. Schloss
Published 2018-06-01

The Gut Microbiota Is Associated with Clearance of Clostridium difficile Infection Independent of Adaptive Immunity

by Jhansi L. Leslie, Kimberly C. Vendrov, Matthew L. Jenior, Vincent B. Young
Published 2019-01-01

Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system

by Patrick D. Schloss, Matthew L. Jenior, Charles C. Koumpouras, Sarah L. Westcott, Sarah K. Highlander
Published 2016-03-01

Clostridium difficile Colonizes Alternative Nutrient Niches during Infection across Distinct Murine Gut Microbiomes

by Matthew L. Jenior, Jhansi L. Leslie, Vincent B. Young, Patrick D. Schloss, Peter J. Turnbaugh
Published 2017-07-01

Multidimensional Clinical Surveillance of Pseudomonas aeruginosa Reveals Complex Relationships between Isolate Source, Morphology, and Antimicrobial Resistance

by Laura J. Dunphy, Glynis L. Kolling, Matthew L. Jenior, Joanne Carroll, April E. Attai, Farzad Farnoud, Amy J. Mathers, Molly A. Hughes, Jason A. Papin
Published 2021-08-01

Ten simple rules to increase computational skills among biologists with Code Clubs.

by Ada K Hagan, Nicholas A Lesniak, Marcy J Balunas, Lucas Bishop, William L Close, Matthew D Doherty, Amanda G Elmore, Kaitlin J Flynn, Geoffrey D Hannigan, Charlie C Koumpouras, Matthew L Jenior, Ariangela J Kozik, Kathryn McBride, Samara B Rifkin, Joshua M A Stough, Kelly L Sovacool, Marc A Sze, Sarah Tomkovich, Begum D Topcuoglu, Patrick D Schloss
Published 2020-08-01