Oxygenation of Hypoxic Coastal Baltic Sea Sediments Impacts on Chemistry, Microbial Community Composition, and Metabolism

by Elias Broman, Varvara Sachpazidou, Jarone Pinhassi, Mark Dopson
Published 2017-12-01

Shifts in coastal sediment oxygenation cause pronounced changes in microbial community composition and associated metabolism

by Elias Broman, Johanna Sjöstedt, Jarone Pinhassi, Mark Dopson
Published 2017-08-01

Depth and Dissolved Organic Carbon Shape Microbial Communities in Surface Influenced but Not Ancient Saline Terrestrial Aquifers

by Margarita Lopez-Fernandez, Mats Åström, Stefan Bertilsson, Mark Dopson
Published 2018-11-01

Indirect DNA extraction method suitable for acidic soil with high clay content

by Eva Högfors-Rönnholm, Stephan Christel, Sten Engblom, Mark Dopson
Published 2018-01-01

Biological Membranes in Extreme Conditions: Simulations of Anionic Archaeal Tetraether Lipid Membranes.

by Luis Felipe Pineda De Castro, Mark Dopson, Ran Friedman
Published 2016-01-01

Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters

by Margarita Lopez-Fernandez, Elias Broman, Domenico Simone, Stefan Bertilsson, Mark Dopson
Published 2019-08-01

Effect of CO2 Concentration on Uptake and Assimilation of Inorganic Carbon in the Extreme Acidophile Acidithiobacillus ferrooxidans

by Mario Esparza, Eugenia Jedlicki, Carolina González, Mark Dopson, David S. Holmes, David S. Holmes
Published 2019-04-01

Evolution of Predicted Acid Resistance Mechanisms in the Extremely Acidophilic <i>Leptospirillum</i> Genus

by Eva Vergara, Gonzalo Neira, Carolina González, Diego Cortez, Mark Dopson, David S. Holmes
Published 2020-04-01

Distinct Coastal Microbiome Populations Associated With Autochthonous- and Allochthonous-Like Dissolved Organic Matter

by Elias Broman, Elias Broman, Eero Asmala, Jacob Carstensen, Jarone Pinhassi, Mark Dopson
Published 2019-11-01

A Novel Inorganic Sulfur Compound Metabolizing Ferroplasma-Like Population Is Suggested to Mediate Extracellular Electron Transfer

by Gaofeng Ni, Domenico Simone, Daniela Palma, Elias Broman, Xiaofen Wu, Stephanie Turner, Mark Dopson
Published 2018-12-01

Identification and Unusual Properties of the Master Regulator FNR in the Extreme Acidophile Acidithiobacillus ferrooxidans

by Héctor Osorio, Erin Mettert, Patricia Kiley, Mark Dopson, Eugenia Jedlicki, David S. Holmes, David S. Holmes, David S. Holmes
Published 2019-07-01

Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere

by Margarita Lopez-Fernandez, Domenico Simone, Xiaofen Wu, Lucile Soler, Emelie Nilsson, Karin Holmfeldt, Henrik Lantz, Stefan Bertilsson, Mark Dopson
Published 2018-11-01

Microbial Community and Metabolic Activity in Thiocyanate Degrading Low Temperature Microbial Fuel Cells

by Gaofeng Ni, Sebastian Canizales, Elias Broman, Domenico Simone, Viraja R. Palwai, Daniel Lundin, Margarita Lopez-Fernandez, Tom Sleutels, Mark Dopson
Published 2018-09-01

Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater

by Maliheh Mehrshad, Margarita Lopez-Fernandez, John Sundh, Emma Bell, Domenico Simone, Moritz Buck, Rizlan Bernier-Latmani, Stefan Bertilsson, Mark Dopson
Published 2021-07-01

Syngas as Electron Donor for Sulfate and Thiosulfate Reducing Haloalkaliphilic Microorganisms in a Gas-Lift Bioreactor

by Caroline M. Plugge, João A. B. Sousa, Stephan Christel, Mark Dopson, Martijn F. M. Bijmans, Alfons J. M. Stams, Martijn Diender
Published 2020-09-01

Diffusible signal factor signaling controls bioleaching activity and niche protection in the acidophilic, mineral-oxidizing leptospirilli

by Sören Bellenberg, Beatriz Salas, Suresh Ganji, Cristian Jorquera-Román, Maria Luisa Valenzuela, Antoine Buetti-Dinh, C. Rikard Unelius, Mark Dopson, Mario Vera
Published 2021-08-01

Towards Bioleaching of a Vanadium Containing Magnetite for Metal Recovery

by Sören Bellenberg, Stephanie Turner, Laura Seidel, Nathan van Wyk, Ruichi Zhang, Varvara Sachpazidou, Rodrigo F. Embile, Ingar Walder, Tiina Leiviskä, Mark Dopson
Published 2021-06-01

The Fennoscandian Shield deep terrestrial virosphere suggests slow motion ‘boom and burst’ cycles

by Karin Holmfeldt, Emelie Nilsson, Domenico Simone, Margarita Lopez-Fernandez, Xiaofen Wu, Ino de Bruijn, Daniel Lundin, Anders F. Andersson, Stefan Bertilsson, Mark Dopson
Published 2021-03-01

Deep neural networks outperform human expert's capacity in characterizing bioleaching bacterial biofilm composition

by Antoine Buetti-Dinh, Vanni Galli, Sören Bellenberg, Olga Ilie, Malte Herold, Stephan Christel, Mariia Boretska, Igor V. Pivkin, Paul Wilmes, Wolfgang Sand, Mario Vera, Mark Dopson
Published 2019-06-01

Reverse engineering directed gene regulatory networks from transcriptomics and proteomics data of biomining bacterial communities with approximate Bayesian computation and steady-s...

by Antoine Buetti-Dinh, Malte Herold, Stephan Christel, Mohamed El Hajjami, Francesco Delogu, Olga Ilie, Sören Bellenberg, Paul Wilmes, Ansgar Poetsch, Wolfgang Sand, Mario Vera, Igor V. Pivkin, Ran Friedman, Mark Dopson
Published 2020-01-01