Peculiar Genes Selection: A new features selection method to improve classification performances in imbalanced data sets.

by Federica Martina, Marco Beccuti, Gianfranco Balbo, Francesca Cordero
Published 2017-01-01

GRAPES-DD: exploiting decision diagrams for index-driven search in biological graph databases

by Nicola Licheri, Vincenzo Bonnici, Marco Beccuti, Rosalba Giugno
Published 2021-04-01

Optimizing a massive parallel sequencing workflow for quantitative miRNA expression analysis.

by Francesca Cordero, Marco Beccuti, Maddalena Arigoni, Susanna Donatelli, Raffaele A Calogero
Published 2012-01-01

Dissecting the genomic activity of a transcriptional regulator by the integrative analysis of omics data

by Giulio Ferrero, Valentina Miano, Marco Beccuti, Gianfranco Balbo, Michele De Bortoli, Francesca Cordero
Published 2017-08-01

State-of-the-Art Fusion-Finder Algorithms Sensitivity and Specificity

by Matteo Carrara, Marco Beccuti, Fulvio Lazzarato, Federica Cavallo, Francesca Cordero, Susanna Donatelli, Raffaele A. Calogero
Published 2013-01-01

A mathematical-biological joint effort to investigate the tumor-initiating ability of Cancer Stem Cells.

by Chiara Fornari, Marco Beccuti, Stefania Lanzardo, Laura Conti, Gianfranco Balbo, Federica Cavallo, Raffaele A Calogero, Francesca Cordero
Published 2014-01-01

A computational framework for modeling and studying pertussis epidemiology and vaccination

by Paolo Castagno, Simone Pernice, Gianni Ghetti, Massimiliano Povero, Lorenzo Pradelli, Daniela Paolotti, Gianfranco Balbo, Matteo Sereno, Marco Beccuti
Published 2020-09-01

Impacts of reopening strategies for COVID-19 epidemic: a modeling study in Piedmont region

by Simone Pernice, Paolo Castagno, Linda Marcotulli, Milena Maria Maule, Lorenzo Richiardi, Giovenale Moirano, Matteo Sereno, Francesca Cordero, Marco Beccuti
Published 2020-10-01

Reproducible bioinformatics project: a community for reproducible bioinformatics analysis pipelines

by Neha Kulkarni, Luca Alessandrì, Riccardo Panero, Maddalena Arigoni, Martina Olivero, Giulio Ferrero, Francesca Cordero, Marco Beccuti, Raffaele A. Calogero
Published 2018-10-01

Sparsely-connected autoencoder (SCA) for single cell RNAseq data mining

by Luca Alessandri, Francesca Cordero, Marco Beccuti, Nicola Licheri, Maddalena Arigoni, Martina Olivero, Maria Flavia Di Renzo, Anna Sapino, Raffaele Calogero
Published 2021-01-01

Computational modeling of the immune response in multiple sclerosis using epimod framework

by Simone Pernice, Laura Follia, Alessandro Maglione, Marzio Pennisi, Francesco Pappalardo, Francesco Novelli, Marinella Clerico, Marco Beccuti, Francesca Cordero, Simona Rolla
Published 2020-12-01

HashClone: a new tool to quantify the minimal residual disease in B-cell lymphoma from deep sequencing data

by Marco Beccuti, Elisa Genuardi, Greta Romano, Luigia Monitillo, Daniela Barbero, Mario Boccadoro, Marco Ladetto, Raffaele Calogero, Simone Ferrero, Francesca Cordero
Published 2017-11-01

A computational approach based on the colored Petri net formalism for studying multiple sclerosis

by Simone Pernice, Marzio Pennisi, Greta Romano, Alessandro Maglione, Santina Cutrupi, Francesco Pappalardo, Gianfranco Balbo, Marco Beccuti, Francesca Cordero, Raffaele A. Calogero
Published 2019-12-01

Docker4Circ: A Framework for the Reproducible Characterization of circRNAs from RNA-Seq Data

by Giulio Ferrero, Nicola Licheri, Lucia Coscujuela Tarrero, Carlo De Intinis, Valentina Miano, Raffaele Adolfo Calogero, Francesca Cordero, Michele De Bortoli, Marco Beccuti
Published 2019-12-01

MET Exon 14 Skipping: A Case Study for the Detection of Genetic Variants in Cancer Driver Genes by Deep Learning

by Vladimir Nosi, Alessandrì Luca, Melissa Milan, Maddalena Arigoni, Silvia Benvenuti, Davide Cacchiarelli, Marcella Cesana, Sara Riccardo, Lucio Di Filippo, Francesca Cordero, Marco Beccuti, Paolo M. Comoglio, Raffaele A. Calogero
Published 2021-04-01

Combinatorial pooling enables selective sequencing of the barley gene space.

by Stefano Lonardi, Denisa Duma, Matthew Alpert, Francesca Cordero, Marco Beccuti, Prasanna R Bhat, Yonghui Wu, Gianfranco Ciardo, Burair Alsaihati, Yaqin Ma, Steve Wanamaker, Josh Resnik, Serdar Bozdag, Ming-Cheng Luo, Timothy J Close
Published 2013-04-01

Integrative Analysis of Novel Metabolic Subtypes in Pancreatic Cancer Fosters New Prognostic Biomarkers

by Laura Follia, Laura Follia, Laura Follia, Giulio Ferrero, Giorgia Mandili, Giorgia Mandili, Marco Beccuti, Daniele Giordano, Rosella Spadi, Maria Antonietta Satolli, Andrea Evangelista, Hiroyuki Katayama, Wang Hong, Amin A. Momin, Michela Capello, Samir M. Hanash, Francesco Novelli, Francesco Novelli, Francesco Novelli, Francesca Cordero
Published 2019-02-01