A thorough analysis of the contribution of experimental, derived and sequence-based predicted protein-protein interactions for functional annotation of proteins.

by Stavros Makrodimitris, Marcel Reinders, Roeland van Ham
Published 2020-01-01

Predicting variant deleteriousness in non-human species: applying the CADD approach in mouse

by Christian Groß, Dick de Ridder, Marcel Reinders
Published 2018-10-01

Detecting statistically significant common insertion sites in retroviral insertional mutagenesis screens.

by Jeroen de Ridder, Anthony Uren, Jaap Kool, Marcel Reinders, Lodewyk Wessels
Published 2006-12-01

CHOP: haplotype-aware path indexing in population graphs

by Tom Mokveld, Jasper Linthorst, Zaid Al-Ars, Henne Holstege, Marcel Reinders
Published 2020-03-01

Identification of networks of co-occurring, tumor-related DNA copy number changes using a genome-wide scoring approach.

by Christiaan Klijn, Jan Bot, David J Adams, Marcel Reinders, Lodewyk Wessels, Jos Jonkers
Published 2010-01-01

Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex.

by Sepideh Babaei, Ahmed Mahfouz, Marc Hulsman, Boudewijn P F Lelieveldt, Jeroen de Ridder, Marcel Reinders
Published 2015-05-01

Prioritizing sequence variants in conserved non-coding elements in the chicken genome using chCADD.

by Christian Groß, Chiara Bortoluzzi, Dick de Ridder, Hendrik-Jan Megens, Martien A M Groenen, Marcel Reinders, Mirte Bosse
Published 2020-09-01

pCADD: SNV prioritisation in Sus scrofa

by Christian Groß, Martijn Derks, Hendrik-Jan Megens, Mirte Bosse, Martien A. M. Groenen, Marcel Reinders, Dick de Ridder
Published 2020-02-01

A mesenchymal stromal cell gene signature for donor age.

by Hugo Alves, Jetty van Ginkel, Nathalie Groen, Marc Hulsman, Anouk Mentink, Marcel Reinders, Clemens van Blitterswijk, Jan de Boer
Published 2012-01-01

Eleven grand challenges in single-cell data science

by David Lähnemann, Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson, Catalina A. Vallejos, Kieran R. Campbell, Niko Beerenwinkel, Ahmed Mahfouz, Luca Pinello, Pavel Skums, Alexandros Stamatakis, Camille Stephan-Otto Attolini, Samuel Aparicio, Jasmijn Baaijens, Marleen Balvert, Buys de Barbanson, Antonio Cappuccio, Giacomo Corleone, Bas E. Dutilh, Maria Florescu, Victor Guryev, Rens Holmer, Katharina Jahn, Thamar Jessurun Lobo, Emma M. Keizer, Indu Khatri, Szymon M. Kielbasa, Jan O. Korbel, Alexey M. Kozlov, Tzu-Hao Kuo, Boudewijn P.F. Lelieveldt, Ion I. Mandoiu, John C. Marioni, Tobias Marschall, Felix Mölder, Amir Niknejad, Lukasz Raczkowski, Marcel Reinders, Jeroen de Ridder, Antoine-Emmanuel Saliba, Antonios Somarakis, Oliver Stegle, Fabian J. Theis, Huan Yang, Alex Zelikovsky, Alice C. McHardy, Benjamin J. Raphael, Sohrab P. Shah, Alexander Schönhuth
Published 2020-02-01