A Comprehensive Analysis of Replicating Merkel Cell Polyomavirus Genomes Delineates the Viral Transcription Program and Suggests a Role for mcv-miR-M1 in Episomal Persistence.

by Juliane Marie Theiss, Thomas Günther, Malik Alawi, Friederike Neumann, Uwe Tessmer, Nicole Fischer, Adam Grundhoff
Published 2015-07-01

Pegivirus Infection in Domestic Pigs, Germany

by Christine Baechlein, Adam Grundhoff, Nicole Fischer, Malik Alawi, Doris Hoeltig, Karl-Heinz Waldmann, Paul Becher
Published 2016-07-01

Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample

by Thomas Günther, Ludwig Haas, Malik Alawi, Peter Wohlsein, Jerzy Marks, Adam Grundhoff, Paul Becher, Nicole Fischer
Published 2017-06-01

Close Relationship of Ruminant Pestiviruses and Classical Swine Fever Virus

by Alexander Postel, Stefanie Schmeiser, Tuba Cigdem Oguzoglu, Daniela Indenbirken, Malik Alawi, Nicole Fischer, Adam Grundhoff, Paul Becher
Published 2015-04-01

Indication of Horizontal DNA Gene Transfer by Extracellular Vesicles.

by Stefanie Fischer, Kerstin Cornils, Thomas Speiseder, Anita Badbaran, Rudolph Reimer, Daniela Indenbirken, Adam Grundhoff, Bärbel Brunswig-Spickenheier, Malik Alawi, Claudia Lange
Published 2016-01-01

Rapid Metagenomic Diagnostics for Suspected Outbreak of Severe Pneumonia

by Nicole Fischer, Holger Rohde, Daniela Indenbirken, Thomas Günther, Kerstin Reumann, Marc Lütgehetmann, Thomas Meyer, Stefan Kluge, Martin Aepfelbacher, Malik Alawi, Adam Grundhoff
Published 2014-06-01

Insights into Microalga and Bacteria Interactions of Selected Phycosphere Biofilms Using Metagenomic, Transcriptomic, and Proteomic Approaches

by Ines Krohn-Molt, Malik Alawi, Konrad U. Förstner, Alena Wiegandt, Lia Burkhardt, Daniela Indenbirken, Melanie Thieß, Adam Grundhoff, Julia Kehr, Andreas Tholey, Wolfgang R. Streit
Published 2017-10-01

Molecular profiling of an osseous metastasis in glioblastoma during checkpoint inhibition: potential mechanisms of immune escape

by Malte Mohme, Cecile L. Maire, Simon Schliffke, Simon A. Joosse, Malik Alawi, Jakob Matschke, Ulrich Schüller, Judith Dierlamm, Tobias Martens, Klaus Pantel, Sabine Riethdorf, Katrin Lamszus, Manfred Westphal
Published 2020-03-01

Deep (Meta)genomics and (Meta)transcriptome Analyses of Fungal and Bacteria Consortia From Aircraft Tanks and Kerosene Identify Key Genes in Fuel and Tank Corrosion

by Ines Krohn, Lutgardis Bergmann, Minyue Qi, Daniela Indenbirken, Yuchen Han, Pablo Perez-Garcia, Elena Katzowitsch, Birgit Hägele, Tim Lübcke, Christian Siry, Ralf Riemann, Malik Alawi, Wolfgang R. Streit
Published 2021-10-01

Versatility of Biofilm Matrix Molecules in Staphylococcus epidermidis Clinical Isolates and Importance of Polysaccharide Intercellular Adhesin Expression during High Shear Stress

by Carolyn R. Schaeffer, Tra-My N. Hoang, Craig M. Sudbeck, Malik Alawi, Isaiah E. Tolo, D. Ashley Robinson, Alexander R. Horswill, Holger Rohde, Paul D. Fey, Sarah E. F. D'Orazio
Published 2016-10-01

High-resolution analysis of Merkel Cell Polyomavirus in Merkel Cell Carcinoma reveals distinct integration patterns and suggests NHEJ and MMBIR as underlying mechanisms.

by Manja Czech-Sioli, Thomas Günther, Marlin Therre, Michael Spohn, Daniela Indenbirken, Juliane Theiss, Sabine Riethdorf, Minyue Qi, Malik Alawi, Corinna Wülbeck, Irene Fernandez-Cuesta, Franziska Esmek, Jürgen C Becker, Adam Grundhoff, Nicole Fischer
Published 2020-08-01

Bromodomain Protein BRD4 Is Required for Estrogen Receptor-Dependent Enhancer Activation and Gene Transcription

by Sankari Nagarajan, Tareq Hossan, Malik Alawi, Zeynab Najafova, Daniela Indenbirken, Upasana Bedi, Hanna Taipaleenmäki, Isabel Ben-Batalla, Marina Scheller, Sonja Loges, Stefan Knapp, Eric Hesse, Cheng-Ming Chiang, Adam Grundhoff, Steven A. Johnsen
Published 2014-07-01

Distinct clonal lineages and within-host diversification shape invasive Staphylococcus epidermidis populations.

by Anna Both, Jiabin Huang, Minyue Qi, Christian Lausmann, Samira Weißelberg, Henning Büttner, Susanne Lezius, Antonio Virgilio Failla, Martin Christner, Marc Stegger, Thorsten Gehrke, Sharmin Baig, Mustafa Citak, Malik Alawi, Martin Aepfelbacher, Holger Rohde
Published 2021-02-01

Immunosuppressive Yersinia Effector YopM Binds DEAD Box Helicase DDX3 to Control Ribosomal S6 Kinase in the Nucleus of Host Cells.

by Laura Berneking, Marie Schnapp, Andreas Rumm, Claudia Trasak, Klaus Ruckdeschel, Malik Alawi, Adam Grundhoff, Alexey G Kikhney, Friedrich Koch-Nolte, Friedrich Buck, Markus Perbandt, Christian Betzel, Dmitri I Svergun, Moritz Hentschke, Martin Aepfelbacher
Published 2016-06-01

A comparative metagenome survey of the fecal microbiota of a breast- and a plant-fed Asian elephant reveals an unexpectedly high diversity of glycoside hydrolase family enzymes.

by Nele Ilmberger, Simon Güllert, Joana Dannenberg, Ulrich Rabausch, Jeremy Torres, Bernd Wemheuer, Malik Alawi, Anja Poehlein, Jennifer Chow, Dimitrij Turaev, Thomas Rattei, Christel Schmeisser, Jesper Salomon, Peter B Olsen, Rolf Daniel, Adam Grundhoff, Martin S Borchert, Wolfgang R Streit
Published 2014-01-01

Vertically transferred maternal immune cells promote neonatal immunity against early life infections

by Ina Annelies Stelzer, Christopher Urbschat, Steven Schepanski, Kristin Thiele, Ioanna Triviai, Agnes Wieczorek, Malik Alawi, Denise Ohnezeit, Julian Kottlau, Jiabin Huang, Nicole Fischer, Hans-Willi Mittrücker, Maria Emilia Solano, Boris Fehse, Anke Diemert, Felix R. Stahl, Petra Clara Arck
Published 2021-08-01

Cellular Importin-α3 Expression Dynamics in the Lung Regulate Antiviral Response Pathways against Influenza A Virus Infection

by Swantje Thiele, Stephanie Stanelle-Bertram, Sebastian Beck, Nancy Mounogou Kouassi, Martin Zickler, Martin Müller, Berfin Tuku, Patricia Resa-Infante, Debby van Riel, Malik Alawi, Thomas Günther, Franziska Rother, Stefanie Hügel, Susanne Reimering, Alice McHardy, Adam Grundhoff, Wolfram Brune, Albert Osterhaus, Michael Bader, Enno Hartmann, Gülsah Gabriel
Published 2020-04-01