A combination of transcription factors mediates inducible interchromosomal contacts

by Seungsoo Kim, Maitreya J Dunham, Jay Shendure
Published 2019-05-01

Origin-dependent inverted-repeat amplification: a replication-based model for generating palindromic amplicons.

by Bonita J Brewer, Celia Payen, M K Raghuraman, Maitreya J Dunham
Published 2011-03-01

Global mapping of transposon location.

by Abram Gabriel, Johannes Dapprich, Mark Kunkel, David Gresham, Stephen C Pratt, Maitreya J Dunham
Published 2006-12-01

High-Throughput Identification of Adaptive Mutations in Experimentally Evolved Yeast Populations.

by Celia Payen, Anna B Sunshine, Giang T Ong, Jamie L Pogachar, Wei Zhao, Maitreya J Dunham
Published 2016-10-01

A modified fluctuation assay reveals a natural mutator phenotype that drives mutation spectrum variation within Saccharomyces cerevisiae

by Pengyao Jiang, Anja R Ollodart, Vidha Sudhesh, Alan J Herr, Maitreya J Dunham, Kelley Harris
Published 2021-09-01

The fitness consequences of aneuploidy are driven by condition-dependent gene effects.

by Anna B Sunshine, Celia Payen, Giang T Ong, Ivan Liachko, Kean Ming Tan, Maitreya J Dunham
Published 2015-05-01

The Hidden Complexity of Mendelian Traits across Natural Yeast Populations

by Jing Hou, Anastasie Sigwalt, Téo Fournier, David Pflieger, Jackson Peter, Jacky de Montigny, Maitreya J. Dunham, Joseph Schacherer
Published 2016-07-01

High Throughput Analyses of Budding Yeast ARSs Reveal New DNA Elements Capable of Conferring Centromere-Independent Plasmid Propagation

by Timothy Hoggard, Ivan Liachko, Cassaundra Burt, Troy Meikle, Katherine Jiang, Gheorghe Craciun, Maitreya J. Dunham, Catherine A. Fox
Published 2016-04-01

The dynamic three-dimensional organization of the diploid yeast genome

by Seungsoo Kim, Ivan Liachko, Donna G Brickner, Kate Cook, William S Noble, Jason H Brickner, Jay Shendure, Maitreya J Dunham
Published 2017-05-01

Temperature preference can bias parental genome retention during hybrid evolution.

by Caiti S Smukowski Heil, Christopher R L Large, Kira Patterson, Angela Shang-Mei Hickey, Chiann-Ling C Yeh, Maitreya J Dunham
Published 2019-09-01

Origin-Dependent Inverted-Repeat Amplification: Tests of a Model for Inverted DNA Amplification.

by Bonita J Brewer, Celia Payen, Sara C Di Rienzi, Megan M Higgins, Giang Ong, Maitreya J Dunham, M K Raghuraman
Published 2015-12-01

A polyploid admixed origin of beer yeasts derived from European and Asian wine populations.

by Justin C Fay, Ping Liu, Giang T Ong, Maitreya J Dunham, Gareth A Cromie, Eric W Jeffery, Catherine L Ludlow, Aimée M Dudley
Published 2019-03-01

Competitive repair by naturally dispersed repetitive DNA during non-allelic homologous recombination.

by Margaret L Hoang, Frederick J Tan, David C Lai, Sue E Celniker, Roger A Hoskins, Maitreya J Dunham, Yixian Zheng, Douglas Koshland
Published 2010-12-01

GC-rich DNA elements enable replication origin activity in the methylotrophic yeast Pichia pastoris.

by Ivan Liachko, Rachel A Youngblood, Kyle Tsui, Kerry L Bubb, Christine Queitsch, M K Raghuraman, Corey Nislow, Bonita J Brewer, Maitreya J Dunham
Published 2014-03-01

Predicting cellular growth from gene expression signatures.

by Edoardo M Airoldi, Curtis Huttenhower, David Gresham, Charles Lu, Amy A Caudy, Maitreya J Dunham, James R Broach, David Botstein, Olga G Troyanskaya
Published 2009-01-01

The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast.

by David Gresham, Michael M Desai, Cheryl M Tucker, Harry T Jenq, Dave A Pai, Alexandra Ward, Christopher G DeSevo, David Botstein, Maitreya J Dunham
Published 2008-12-01

Differential paralog divergence modulates genome evolution across yeast species.

by Monica R Sanchez, Aaron W Miller, Ivan Liachko, Anna B Sunshine, Bryony Lynch, Mei Huang, Erica Alcantara, Christopher G DeSevo, Dave A Pai, Cheryl M Tucker, Margaret L Hoang, Maitreya J Dunham
Published 2017-02-01

Neocentromeres Provide Chromosome Segregation Accuracy and Centromere Clustering to Multiple Loci along a Candida albicans Chromosome.

by Laura S Burrack, Hannah F Hutton, Kathleen J Matter, Shelly Applen Clancey, Ivan Liachko, Alexandra E Plemmons, Amrita Saha, Erica A Power, Breanna Turman, Mathuravani Aaditiyaa Thevandavakkam, Ferhat Ay, Maitreya J Dunham, Judith Berman
Published 2016-09-01

Interrogation of CYP2D6 Structural Variant Alleles Improves the Correlation Between CYP2D6 Genotype and CYP2D6‐Mediated Metabolic Activity

by Rachel Dalton, Seung‐been Lee, Katrina G. Claw, Bhagwat Prasad, Brian R. Phillips, Danny D. Shen, Lai Hong Wong, Mitch Fade, Matthew G. McDonald, Maitreya J. Dunham, Douglas M. Fowler, Allan E. Rettie, Erin Schuetz, Timothy A. Thornton, Deborah A. Nickerson, Andrea Gaedigk, Kenneth E. Thummel, Erica L. Woodahl
Published 2020-01-01