CoreProbe: A Novel Algorithm for Estimating Relative Abundance Based on Metagenomic Reads

by Dongmei Ai, Hongfei Pan, Ruocheng Huang, Li C. Xia
Published 2018-06-01

Constructing the Microbial Association Network from Large-Scale Time Series Data Using Granger Causality

by Dongmei Ai, Xiaoxin Li, Gang Liu, Xiaoyi Liang, Li C. Xia
Published 2019-03-01

Association network analysis identifies enzymatic components of gut microbiota that significantly differ between colorectal cancer patients and healthy controls

by Dongmei Ai, Hongfei Pan, Xiaoxin Li, Min Wu, Li C. Xia
Published 2019-07-01

The statistical power of k-mer based aggregative statistics for alignment-free detection of horizontal gene transfer

by Guan-Da Huang, Xue-Mei Liu, Tian-Lai Huang, Li- C. Xia
Published 2019-09-01

Accurate genome relative abundance estimation based on shotgun metagenomic reads.

by Li C Xia, Jacob A Cram, Ting Chen, Jed A Fuhrman, Fengzhu Sun
Published 2011-01-01

Using Decision Tree Aggregation with Random Forest Model to Identify Gut Microbes Associated with Colorectal Cancer

by Dongmei Ai, Hongfei Pan, Rongbao Han, Xiaoxin Li, Gang Liu, Li C. Xia
Published 2019-02-01

Explore mediated co-varying dynamics in microbial community using integrated local similarity and liquid association analysis

by Dongmei Ai, Xiaoxin Li, Hongfei Pan, Jiamin Chen, Jacob A. Cram, Li C. Xia
Published 2019-04-01

Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model

by Dongmei Ai, Dongmei Ai, Hongfei Pan, Xiaoxin Li, Yingxin Gao, Gang Liu, Li C. Xia
Published 2019-04-01

CRISPR–Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis

by GiWon Shin, Susan M. Grimes, HoJoon Lee, Billy T. Lau, Li C. Xia, Hanlee P. Ji
Published 2017-02-01

Transcriptional Changes in CD16+ Monocytes May Contribute to the Pathogenesis of COVID-19

by Vanessa Chilunda, Pablo Martinez-Aguado, Li C. Xia, Laura Cheney, Laura Cheney, Aniella Murphy, Veronica Veksler, Vanessa Ruiz, Tina M. Calderon, Joan W. Berman, Joan W. Berman
Published 2021-05-01