Computational Identification of Tissue-Specific Splicing Regulatory Elements in Human Genes from RNA-Seq Data.

by Eman Badr, Mahmoud ElHefnawi, Lenwood S Heath
Published 2016-01-01

REGEN: Ancestral Genome Reconstruction for Bacteria

by João C. Setubal, Kuan Yang, Lenwood S. Heath
Published 2012-07-01

Comparing time series transcriptome data between plants using a network module finding algorithm

by Jiyoung Lee, Lenwood S. Heath, Ruth Grene, Song Li
Published 2019-06-01

LINflow: a computational pipeline that combines an alignment-free with an alignment-based method to accelerate generation of similarity matrices for prokaryotic genomes

by Long Tian, Reza Mazloom, Lenwood S. Heath, Boris A. Vinatzer
Published 2021-03-01

Expresso: A database and web server for exploring the interaction of transcription factors and their target genes in Arabidopsis thaliana using ChIP-Seq peak data [version 1; refer...

by Delasa Aghamirzaie, Karthik Raja Velmurugan, Shuchi Wu, Doaa Altarawy, Lenwood S. Heath, Ruth Grene
Published 2017-03-01

MetaStorm: A Public Resource for Customizable Metagenomics Annotation.

by Gustavo Arango-Argoty, Gargi Singh, Lenwood S Heath, Amy Pruden, Weidong Xiao, Liqing Zhang
Published 2016-01-01

DeepARG: a deep learning approach for predicting antibiotic resistance genes from metagenomic data

by Gustavo Arango-Argoty, Emily Garner, Amy Pruden, Lenwood S. Heath, Peter Vikesland, Liqing Zhang
Published 2018-02-01

Changes in RNA Splicing in Developing Soybean (Glycine max) Embryos

by Delasa Aghamirzaie, Mahdi Nabiyouni, Yihui Fang, Curtis Klumas, Lenwood S. Heath, Ruth Grene, Eva Collakova
Published 2013-11-01

Cyberbiosecurity Challenges of Pathogen Genome Databases

by Boris A. Vinatzer, Lenwood S. Heath, Hussain M. J. Almohri, Michael J. Stulberg, Christopher Lowe, Song Li
Published 2019-05-01

Effect of antibiotic use and composting on antibiotic resistance gene abundance and resistome risks of soils receiving manure-derived amendments

by Chaoqi Chen, Christine A. Pankow, Min Oh, Lenwood S. Heath, Liqing Zhang, Pang Du, Kang Xia, Amy Pruden
Published 2019-07-01

A system to automatically classify and name any individual genome-sequenced organism independently of current biological classification and nomenclature.

by Haitham Marakeby, Eman Badr, Hanaa Torkey, Yuhyun Song, Scotland Leman, Caroline L Monteil, Lenwood S Heath, Boris A Vinatzer
Published 2014-01-01

Metabolic and Transcriptional Reprogramming in Developing Soybean (Glycine max) Embryos

by Ruth Grene, Lenwood S. Heath, Elijah Myers, Farzaneh Tabataba, Akshay Kakumanu, Curtis Klumas, Delasa Aghamirzaie, Yihui Fang, Eva Collakova
Published 2013-05-01

Systematic auditing is essential to debiasing machine learning in biology

by Fatma-Elzahraa Eid, Haitham A. Elmarakeby, Yujia Alina Chan, Nadine Fornelos, Mahmoud ElHefnawi, Eliezer M. Van Allen, Lenwood S. Heath, Kasper Lage
Published 2021-02-01

Mining and visualization of microarray and metabolomic data reveal extensive cell wall remodeling during winter hardening in Sitka spruce (Picea sitchensis)

by Ruth eGrene, Curtis eKlumas, Haktan eSuren, Kuan eYang, Eva eCollakova, Elijah Samuel Myers, Lenwood Scott Heath, Jason eHoliday
Published 2012-10-01

AgroSeek: a system for computational analysis of environmental metagenomic data and associated metadata

by Xiao Liang, Kyle Akers, Ishi Keenum, Lauren Wind, Suraj Gupta, Chaoqi Chen, Reem Aldaihani, Amy Pruden, Liqing Zhang, Katharine F. Knowlton, Kang Xia, Lenwood S. Heath
Published 2021-03-01