Efficient Acceleration of the Pair-HMMs Forward Algorithm for GATK HaplotypeCaller on Graphics Processing Units

by Shanshan Ren, Koen Bertels, Zaid Al-Ars
Published 2018-03-01

Estimating Algorithmic Information Using Quantum Computing for Genomics Applications

by Aritra Sarkar, Zaid Al-Ars, Koen Bertels
Published 2021-03-01

GPU accelerated sequence alignment with traceback for GATK HaplotypeCaller

by Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars
Published 2019-04-01

GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads

by Nauman Ahmed, Tong Dong Qiu, Koen Bertels, Zaid Al-Ars
Published 2020-09-01

Evaluation of Runtime Task Mapping Using the rSesame Framework

by Kamana Sigdel, Carlo Galuzzi, Koen Bertels, Mark Thompson, Andy D. Pimentel
Published 2012-01-01

Correction to: GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data

by Nauman Ahmed, Jonathan Lévy, Shanshan Ren, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars
Published 2019-11-01

GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data

by Nauman Ahmed, Jonathan Lévy, Shanshan Ren, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars
Published 2019-10-01

Quantum Computer Architecture Toward Full-Stack Quantum Accelerators

by Koen Bertels, A. Sarkar, T. Hubregtsen, M. Serrao, A.A. Mouedenne, A. Yadav, A. Krol, I. Ashraf, C. Garcia Almudever
Published 2020-01-01