Systems biology driven software design for the research enterprise

by Killcoyne Sarah, Cavnor Christopher, Boyle John, Shmulevich Ilya
Published 2008-06-01

Methods for visual mining of genomic and proteomic data atlases

by Boyle John, Kreisberg Richard, Bressler Ryan, Killcoyne Sarah
Published 2012-04-01

SAMQA: error classification and validation of high-throughput sequenced read data

by Bressler Ryan, Killcoyne Sarah, Robinson Thomas, Boyle John
Published 2011-08-01

Adaptable data management for systems biology investigations

by Burdick David, Cavnor Chris, Rovira Hector, Boyle John, Killcoyne Sarah, Shmulevich Ilya
Published 2009-03-01

Hydra: a scalable proteomic search engine which utilizes the Hadoop distributed computing framework

by Lewis Steven, Csordas Attila, Killcoyne Sarah, Hermjakob Henning, Hoopmann Michael R, Moritz Robert L, Deutsch Eric W, Boyle John
Published 2012-12-01

SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments

by Rovira Hector, Ramsey Stephen A, Marzolf Bruz, Lin Jake, Killcoyne Sarah, Handcock Jeremy, Cavnor Chris C, Burdick David B, Bressler Ryan, Shmulevich Ilya, Boyle John
Published 2010-07-01