A least angle regression model for the prediction of canonical and non-canonical miRNA-mRNA interactions.

by Julia C Engelmann, Rainer Spang
Published 2012-01-01

FastqPuri: high-performance preprocessing of RNA-seq data

by Paula Pérez-Rubio, Claudio Lottaz, Julia C. Engelmann
Published 2019-05-01

Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation

by Julia C. Engelmann, Rol, Schwarz, Steffen Blenk, Torben Friedrich, Philipp N. Seibel, Thomas Dandekar, Tobias Müller
Published 2008-05-01

Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation

by Julia C. Engelmann, Roland Schwarz, Steffen Blenk, Torben Friedrich, Philipp N. Seibel, Thomas Dandekar, Tobias Müller
Published 2008-01-01

Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation

by Julia C. Engelmann, Roland Schwarz, Steffen Blenk, Torben Friedrich, Philipp N. Seibel, Thomas Dandekar, Tobias Müller
Published 2008-01-01

Analysis of a coastal North Sea fish community: Comparison of aquatic environmental DNA concentrations to fish catches

by Judith D. L. vanBleijswijk, Julia C. Engelmann, Lise Klunder, Harry J. Witte, Johannes IJ. Witte, Henk W. van derVeer
Published 2020-10-01

Is gene activity in plant cells affected by UMTS-irradiation? A whole genome approach

by Julia C Engelmann, Rosalia Deeken, Tobias Müller, Günter Nimtz, M Rob G Roelfsema, Rainer Hedrich
Published 2008-10-01

Cascabel: A Scalable and Versatile Amplicon Sequence Data Analysis Pipeline Delivering Reproducible and Documented Results

by Alejandro Abdala Asbun, Marc A. Besseling, Sergio Balzano, Judith D. L. van Bleijswijk, Harry J. Witte, Laura Villanueva, Laura Villanueva, Julia C. Engelmann
Published 2020-11-01

Learning from Embryogenesis—A Comparative Expression Analysis in Melanoblast Differentiation and Tumorigenesis Reveals miRNAs Driving Melanoma Development

by Lisa Linck-Paulus, Lisa Lämmerhirt, Daniel Völler, Katharina Meyer, Julia C. Engelmann, Rainer Spang, Norbert Eichner, Gunter Meister, Silke Kuphal, Anja Katrin Bosserhoff
Published 2021-05-01

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

by Karsten Kleo, Lora Dimitrova, Elisabeth Oker, Nancy Tomaszewski, Erika Berg, Franziska Taruttis, Julia C. Engelmann, Philipp Schwarzfischer, Jörg Reinders, Rainer Spang, Wolfram Gronwald, Peter J. Oefner, Michael Hummel
Published 2019-04-01

Microbial Communities on Plastic Polymers in the Mediterranean Sea

by Annika Vaksmaa, Katrin Knittel, Alejandro Abdala Asbun, Maaike Goudriaan, Andreas Ellrott, Harry J. Witte, Ina Vollmer, Florian Meirer, Christian Lott, Miriam Weber, Julia C. Engelmann, Helge Niemann, Helge Niemann
Published 2021-06-01

The Crystal Structure of the NHL Domain in Complex with RNA Reveals the Molecular Basis of Drosophila Brain-Tumor-Mediated Gene Regulation

by Inga Loedige, Leonhard Jakob, Thomas Treiber, Debashish Ray, Mathias Stotz, Nora Treiber, Janosch Hennig, Kate B. Cook, Quaid Morris, Timothy R. Hughes, Julia C. Engelmann, Michael P. Krahn, Gunter Meister
Published 2015-11-01

Causal Modeling of Cancer-Stromal Communication Identifies PAPPA as a Novel Stroma-Secreted Factor Activating NFκB Signaling in Hepatocellular Carcinoma.

by Julia C Engelmann, Thomas Amann, Birgitta Ott-Rötzer, Margit Nützel, Yvonne Reinders, Jörg Reinders, Wolfgang E Thasler, Theresa Kristl, Andreas Teufel, Christian G Huber, Peter J Oefner, Rainer Spang, Claus Hellerbrand
Published 2015-05-01

Slug Is Increased in Vascular Remodeling and Induces a Smooth Muscle Cell Proliferative Phenotype.

by Núria Coll-Bonfill, Victor I Peinado, María V Pisano, Marcelina Párrizas, Isabel Blanco, Maurits Evers, Julia C Engelmann, Jessica García-Lucio, Olga Tura-Ceide, Gunter Meister, Joan Albert Barberà, Melina M Musri
Published 2016-01-01

Correction: Slug Is Increased in Vascular Remodeling and Induces a Smooth Muscle Cell Proliferative Phenotype.

by Núria Coll-Bonfill, Victor I Peinado, María V Pisano, Marcelina Párrizas, Isabel Blanco, Maurits Evers, Julia C Engelmann, Jessica García-Lucio, Olga Tura-Ceide, Gunter Meister, Joan Albert Barberà, Melina M Musri
Published 2016-01-01

Transcriptome Analysis in Tardigrade Species Reveals Specific Molecular Pathways for Stress Adaptations

by Frank Förster, Daniela Beisser, Markus A. Grohme, Chunguang Liang, Brahim Mali, Alexander Matthias Siegl, Julia C. Engelmann, Alexander V. Shkumatov, Elham Schokraie, Tobias Müller, Martina Schnölzer, Ralph O. Schill, Marcus Frohme, Thomas Dandekar
Published 2012-04-01

Transcriptome Analysis in Tardigrade Species Reveals Specific Molecular Pathways for Stress Adaptations

by Frank Förster, Daniela Beisser, Markus A. Grohme, Chunguang Liang, Brahim Mali, Alexander Matthias Siegl, Julia C. Engelmann, Alexander V. Shkumatov, Elham Schokraie, Tobias Müller, Martina Schnölzer, Ralph O. Schill, Marcus Frohme, Thomas Dandekar
Published 2012-01-01

Cooperative STAT/NF-κB signaling regulates lymphoma metabolic reprogramming and aberrant GOT2 expression

by Maren Feist, Philipp Schwarzfischer, Paul Heinrich, Xueni Sun, Judith Kemper, Frederike von Bonin, Paula Perez-Rubio, Franziska Taruttis, Thorsten Rehberg, Katja Dettmer, Wolfram Gronwald, Jörg Reinders, Julia C. Engelmann, Jan Dudek, Wolfram Klapper, Lorenz Trümper, Rainer Spang, Peter J. Oefner, Dieter Kube
Published 2018-04-01

High CD206 levels in Hodgkin lymphoma‐educated macrophages are linked to matrix‐remodeling and lymphoma dissemination

by Annekatrin Arlt, Frederike vonBonin, Thorsten Rehberg, Paula Perez‐Rubio, Julia C. Engelmann, Katharina Limm, Sarah Reinke, Christian Dullin, Xueni Sun, Rieke Specht, Markus Maulhardt, Franziska Linke, Gertrude Bunt, Wolfram Klapper, Martina Vockerodt, Jörg Wilting, Tobias Pukrop, Katja Dettmer, Wolfram Gronwald, Peter J. Oefner, Rainer Spang, Dieter Kube
Published 2020-03-01