scDC: single cell differential composition analysis

by Yue Cao, Yingxin Lin, John T. Ormerod, Pengyi Yang, Jean Y.H. Yang, Kitty K. Lo
Published 2019-12-01

Autoencoder-based cluster ensembles for single-cell RNA-seq data analysis

by Thomas A. Geddes, Taiyun Kim, Lihao Nan, James G. Burchfield, Jean Y. H. Yang, Dacheng Tao, Pengyi Yang
Published 2019-12-01

LC-N2G: a local consistency approach for nutrigenomics data analysis

by Xiangnan Xu, Samantha M. Solon-Biet, Alistair Senior, David Raubenheimer, Stephen J. Simpson, Luigi Fontana, Samuel Mueller, Jean Y. H. Yang
Published 2020-11-01

Gene expression allelic imbalance in ovine brown adipose tissue impacts energy homeostasis.

by Shila Ghazanfar, Tony Vuocolo, Janna L Morrison, Lisa M Nicholas, Isabella C McMillen, Jean Y H Yang, Michael J Buckley, Ross L Tellam
Published 2017-01-01

Single-cell RNA-Seq analysis reveals dynamic trajectories during mouse liver development

by Xianbin Su, Yi Shi, Xin Zou, Zhao-Ning Lu, Gangcai Xie, Jean Y. H. Yang, Chong-Chao Wu, Xiao-Fang Cui, Kun-Yan He, Qing Luo, Yu-Lan Qu, Na Wang, Lan Wang, Ze-Guang Han
Published 2017-12-01

Transcriptional downregulation of MHC class I and melanoma de- differentiation in resistance to PD-1 inhibition

by Jenny H. Lee, Elena Shklovskaya, Su Yin Lim, Matteo S. Carlino, Alexander M. Menzies, Ashleigh Stewart, Bernadette Pedersen, Malama Irvine, Sara Alavi, Jean Y. H. Yang, Dario Strbenac, Robyn P. M. Saw, John F. Thompson, James S. Wilmott, Richard A. Scolyer, Georgina V. Long, Richard F. Kefford, Helen Rizos
Published 2020-04-01

Clonal evolution in liver cancer at single-cell and single-variant resolution

by Xianbin Su, Linan Zhao, Yi Shi, Rui Zhang, Qi Long, Shihao Bai, Qing Luo, Yingxin Lin, Xin Zou, Shila Ghazanfar, Kun Tao, Guoliang Yang, Lan Wang, Kun-Yan He, Xiaofang Cui, Jian He, Jiao-Xiang Wu, Bo Han, Bin Yan, Biao Deng, Na Wang, Xiaolin Li, Pengyi Yang, Shangwei Hou, Jielin Sun, Jean Y. H. Yang, Jinhong Chen, Ze-Guang Han
Published 2021-02-01