Dynamics, a Powerful Component of Current and Future in Silico Approaches for Protein Design and Engineering

by Bartłomiej Surpeta, Carlos Eduardo Sequeiros-Borja, Jan Brezovsky
Published 2020-04-01

PredictSNP2: A Unified Platform for Accurately Evaluating SNP Effects by Exploiting the Different Characteristics of Variants in Distinct Genomic Regions.

by Jaroslav Bendl, Miloš Musil, Jan Štourač, Jaroslav Zendulka, Jiří Damborský, Jan Brezovský
Published 2016-05-01

Fructose 1-phosphate is the one and only physiological effector of the Cra (FruR) regulator of Pseudomonas putida

by Max Chavarría, Gonzalo Durante-Rodríguez, Tino Krell, César Santiago, Jan Brezovsky, Jiri Damborsky, Víctor de Lorenzo
Published 2014-01-01

PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations.

by Jaroslav Bendl, Jan Stourac, Ondrej Salanda, Antonin Pavelka, Eric D Wieben, Jaroslav Zendulka, Jan Brezovsky, Jiri Damborsky
Published 2014-01-01

FireProt: Energy- and Evolution-Based Computational Design of Thermostable Multiple-Point Mutants.

by David Bednar, Koen Beerens, Eva Sebestova, Jaroslav Bendl, Sagar Khare, Radka Chaloupkova, Zbynek Prokop, Jan Brezovsky, David Baker, Jiri Damborsky
Published 2015-11-01

Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium <i>Marinobacter</i> sp. ELB17

by Lukas Chrast, Katsiaryna Tratsiak, Joan Planas-Iglesias, Lukas Daniel, Tatyana Prudnikova, Jan Brezovsky, David Bednar, Ivana Kuta Smatanova, Radka Chaloupkova, Jiri Damborsky
Published 2019-10-01

CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures.

by Eva Chovancova, Antonin Pavelka, Petr Benes, Ondrej Strnad, Jan Brezovsky, Barbora Kozlikova, Artur Gora, Vilem Sustr, Martin Klvana, Petr Medek, Lada Biedermannova, Jiri Sochor, Jiri Damborsky
Published 2012-01-01