Network module detection: Affinity search technique with the multi-node topological overlap measure

by Horvath Steve, Li Ai
Published 2009-07-01

WGCNA: an R package for weighted correlation network analysis

by Horvath Steve, Langfelder Peter
Published 2008-12-01

Gene network interconnectedness and the generalized topological overlap measure

by Horvath Steve, Yip Andy M
Published 2007-01-01

Comparison of co-expression measures: mutual information, correlation, and model based indices

by Song Lin, Langfelder Peter, Horvath Steve
Published 2012-12-01

Signed weighted gene co-expression network analysis of transcriptional regulation in murine embryonic stem cells

by Zhou Qing, Plath Kathrin, Fan Guoping, Mason Mike J, Horvath Steve
Published 2009-07-01

Gene connectivity, function, and sequence conservation: predictions from modular yeast co-expression networks

by Horvath Steve, Mischel Paul S, Zhang Bin, Fang Zixing, Carlson Marc RJ, Nelson Stanley F
Published 2006-03-01

Text-mining applied to autoimmune disease research: the Sjögren’s syndrome knowledge base

by Gorr Sven-Ulrik, Wennblom Trevor J, Horvath Steve, Wong David TW, Michie Sara A
Published 2012-07-01

Gene expression profiling in C57BL/6J and A/J mouse inbred strains reveals gene networks specific for brain regions independent of genetic background

by Horvath Steve, Strengman Eric, Janson Esther, Fuller Tova F, de Jong S Simone, Kas Martien JH, Ophoff Roel A
Published 2010-01-01

Strategies for aggregating gene expression data: The collapseRows R function

by Miller Jeremy A, Cai Chaochao, Langfelder Peter, Geschwind Daniel H, Kurian Sunil M, Salomon Daniel R, Horvath Steve
Published 2011-08-01

Elevated MED28 expression predicts poor outcome in women with breast cancer

by Horvath Steve, Li Ai, Elshimali Yahya, Maresh Erin L, Yoon Nam K, Seligson David B, Chia David, Goodglick Lee
Published 2010-06-01

Is human blood a good surrogate for brain tissue in transcriptional studies?

by van den Berg Leonard H, Luo Rui, Oldham Michael C, Fuller Tova F, Langfelder Peter, Cai Chaochao, Ophoff Roel A, Horvath Steve
Published 2010-10-01

Protein expression based multimarker analysis of breast cancer samples

by Rajasekaran Ayyappan K, Maresh Erin L, Alavi Mohammad, Mah Vei, Bagryanova Lora, Yoon Nam K, Presson Angela P, Goodglick Lee, Chia David, Horvath Steve
Published 2011-06-01

Differential expression of anterior gradient gene AGR2 in prostate cancer

by Knutzen Laura A, Bagryanova Lora, Liebeskind Emily S, Horvath Steve, Alavi Mohammad, Mah Vei, Maresh Erin L, Zhou Yong, Chia David, Liu Alvin Y, Goodglick Lee
Published 2010-12-01

Gene expression analysis of glioblastomas identifies the major molecular basis for the prognostic benefit of younger age

by Farooqi Haumith K, Liau Linda M, Dong Jun, Lai Albert, Cloughesy Timothy F, Scheck Adrienne C, Lee Yohan, Horvath Steve, Mischel Paul S, Nelson Stanley F
Published 2008-10-01

Expression of phosphorylated raf kinase inhibitor protein (pRKIP) is a predictor of lung cancer survival

by Chia David, Horvath Steve, Vega Mario I, Maresh Erin L, Chatterjee Devasis, Rivera-Pazos Clara M, Mah Vei, Hernandez-Cueto Angeles, Yoon Nam K, Huerta-Yepez Sara, Bonavida Benjamin, Goodglick Lee
Published 2011-06-01

Weighted gene co-expression network analysis of the peripheral blood from Amyotrophic Lateral Sclerosis patients

by DeYoung Joseph, Langfelder Peter, Fuller Tova F, Blauw Hylke M, van Es Michael A, van Vught Paul WJ, Horvath Steve, Saris Christiaan GJ, Wokke John HJ, Veldink Jan H, van den Berg Leonard H, Ophoff Roel A
Published 2009-08-01

Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects

by van Eijk Kristel R, de Jong Simone, Boks Marco PM, Langeveld Terry, Colas Fabrice, Veldink Jan H, de Kovel Carolien GF, Janson Esther, Strengman Eric, Langfelder Peter, Kahn René S, van den Berg Leonard H, Horvath Steve, Ophoff Roel A
Published 2012-11-01

Adipose Co-expression networks across Finns and Mexicans identify novel triglyceride-associated genes

by Haas Blake E, Horvath Steve, Pietiläinen Kirsi H, Cantor Rita M, Nikkola Elina, Weissglas-Volkov Daphna, Rissanen Aila, Civelek Mete, Cruz-Bautista Ivette, Riba Laura, Kuusisto Johanna, Kaprio Jaakko, Tusie-Luna Teresa, Laakso Markku, Aguilar-Salinas Carlos A, Pajukanta Päivi
Published 2012-12-01