Determining the control circuitry of redox metabolism at the genome-scale.

by Stephen Federowicz, Donghyuk Kim, Ali Ebrahim, Joshua Lerman, Harish Nagarajan, Byung-kwan Cho, Karsten Zengler, Bernhard Palsson
Published 2014-04-01

Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens.

by Adam M Feist, Harish Nagarajan, Amelia-Elena Rotaru, Pier-Luc Tremblay, Tian Zhang, Kelly P Nevin, Derek R Lovley, Karsten Zengler
Published 2014-04-01

Comparative analysis of regulatory elements between Escherichia coli and Klebsiella pneumoniae by genome-wide transcription start site profiling.

by Donghyuk Kim, Jay Sung-Joong Hong, Yu Qiu, Harish Nagarajan, Joo-Hyun Seo, Byung-Kwan Cho, Shih-Feng Tsai, Bernhard Ø Palsson
Published 2012-01-01

Exploiting adaptive laboratory evolution of Streptomyces clavuligerus for antibiotic discovery and overproduction.

by Pep Charusanti, Nicole L Fong, Harish Nagarajan, Alban R Pereira, Howard J Li, Elisa A Abate, Yongxuan Su, William H Gerwick, Bernhard O Palsson
Published 2012-01-01

De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.

by Harish Nagarajan, Jessica E Butler, Anna Klimes, Yu Qiu, Karsten Zengler, Joy Ward, Nelson D Young, Barbara A Methé, Bernhard Ø Palsson, Derek R Lovley, Christian L Barrett
Published 2010-06-01

The genome organization of Thermotoga maritima reflects its lifestyle.

by Haythem Latif, Joshua A Lerman, Vasiliy A Portnoy, Yekaterina Tarasova, Harish Nagarajan, Alexandra C Schrimpe-Rutledge, Richard D Smith, Joshua N Adkins, Dae-Hee Lee, Yu Qiu, Karsten Zengler
Published 2013-04-01