Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities

by Bianchi Valerio, Gherardini Pier Federico, Helmer-Citterich Manuela, Ausiello Gabriele
Published 2012-03-01

Structural motifs recurring in different folds recognize the same ligand fragments

by Incani Ottaviano, Gatti Elena, Gherardini Pier, Ausiello Gabriele, Helmer-Citterich Manuela
Published 2009-06-01

False occurrences of functional motifs in protein sequences highlight evolutionary constraints

by Ausiello Gabriele, Ferraro Enrico, Gherardini Pier, Via Allegra, Scalia Tomba Gianpaolo, Helmer-Citterich Manuela
Published 2007-03-01

PhosTryp: a phosphorylation site predictor specific for parasitic protozoa of the family trypanosomatidae

by Palmeri Antonio, Gherardini Pier Federico, Tsigankov Polina, Ausiello Gabriele, Späth Gerald F, Zilberstein Dan, Helmer-Citterich Manuela
Published 2011-12-01