Prokaryotic Population Dynamics and Viral Predation in a Marine Succession Experiment Using Metagenomics

by Jose M. Haro-Moreno, Francisco Rodriguez-Valera, Francisco Rodriguez-Valera, Mario López-Pérez
Published 2019-12-01

Enhanced Recovery of Microbial Genes and Genomes From a Marine Water Column Using Long-Read Metagenomics

by Jose M. Haro-Moreno, Mario López-Pérez, Francisco Rodriguez-Valera, Francisco Rodriguez-Valera
Published 2021-08-01

CRISPR analysis suggests that small circular single-stranded DNA smacoviruses infect Archaea instead of humans

by César Díez-Villaseñor, Francisco Rodriguez-Valera
Published 2019-01-01

Is the pan-genome also a pan-selectome? [v1; ref status: indexed, http://f1000r.es/Vl9wKI]

by Francisco Rodriguez-Valera, David W Ussery
Published 2012-09-01

Marine-freshwater prokaryotic transitions require extensive changes in the predicted proteome

by Pedro J. Cabello-Yeves, Francisco Rodriguez-Valera
Published 2019-08-01

Trends of Microdiversity Reveal Depth-Dependent Evolutionary Strategies of Viruses in the Mediterranean

by Felipe Hernandes Coutinho, Riccardo Rosselli, Francisco Rodríguez-Valera
Published 2019-11-01

Metagenome Mining Reveals Hidden Genomic Diversity of Pelagimyophages in Aquatic Environments

by Asier Zaragoza-Solas, Francisco Rodriguez-Valera, Mario López-Pérez
Published 2020-02-01

Thousands of Novel Endolysins Discovered in Uncultured Phage Genomes

by Iris Fernández-Ruiz, Felipe H. Coutinho, Francisco Rodriguez-Valera
Published 2018-05-01

Wild eel microbiome reveals that skin mucus of fish could be a natural niche for aquatic mucosal pathogen evolution

by Miguel Carda-Diéguez, Rohit Ghai, Francisco Rodríguez-Valera, Carmen Amaro
Published 2017-12-01

Expanding the marine virosphere using metagenomics.

by Carolina Megumi Mizuno, Francisco Rodriguez-Valera, Nikole E Kimes, Rohit Ghai
Published 2013-01-01

Genomes of Abundant and Widespread Viruses from the Deep Ocean

by Carolina Megumi Mizuno, Rohit Ghai, Aurélien Saghai, Purificaciéón Léóópez-Garcéóóía, Francisco Rodriguez-Valera
Published 2016-07-01

Transcriptome analysis of Haloquadratum walsbyi: vanity is but the surface

by Henk Bolhuis, Ana Belén Martín-Cuadrado, Riccardo Rosselli, Lejla Pašić, Francisco Rodriguez-Valera
Published 2017-07-01

Reconstruction of Diverse Verrucomicrobial Genomes from Metagenome Datasets of Freshwater Reservoirs

by Pedro J. Cabello-Yeves, Rohit Ghai, Maliheh Mehrshad, Antonio Picazo, Antonio Camacho, Francisco Rodriguez-Valera
Published 2017-11-01

Uncovering a hidden diversity: optimized protocols for the extraction of dsDNA bacteriophages from soil

by Pauline C. Göller, Jose M. Haro-Moreno, Francisco Rodriguez-Valera, Martin J. Loessner, Elena Gómez-Sanz
Published 2020-02-01

Genome diversity of marine phages recovered from Mediterranean metagenomes: Size matters.

by Mario López-Pérez, Jose M Haro-Moreno, Rafael Gonzalez-Serrano, Marcos Parras-Moltó, Francisco Rodriguez-Valera
Published 2017-09-01

A hybrid NRPS-PKS gene cluster related to the bleomycin family of antitumor antibiotics in Alteromonas macleodii strains.

by Carolina Megumi Mizuno, Nikole E Kimes, Mario López-Pérez, Eva Ausó, Francisco Rodriguez-Valera, Rohit Ghai
Published 2013-01-01

Genomic Comparison and Spatial Distribution of Different Synechococcus Phylotypes in the Black Sea

by Andrea Di Cesare, Nina Dzhembekova, Pedro J. Cabello-Yeves, Ester M. Eckert, Violeta Slabakova, Nataliya Slabakova, Elisaveta Peneva, Roberto Bertoni, Gianluca Corno, Michaela M. Salcher, Lyudmila Kamburska, Filippo Bertoni, Francisco Rodriguez-Valera, Francisco Rodriguez-Valera, Snejana Moncheva, Cristiana Callieri
Published 2020-08-01

Fine metagenomic profile of the Mediterranean stratified and mixed water columns revealed by assembly and recruitment

by Jose M. Haro-Moreno, Mario López-Pérez, José R. de la Torre, Antonio Picazo, Antonio Camacho, Francisco Rodriguez-Valera
Published 2018-07-01

Reconstructing viral genomes from the environment using fosmid clones: the case of haloviruses.

by Inmaculada Garcia-Heredia, Ana-Belen Martin-Cuadrado, Francisco J M Mojica, Fernando Santos, Alex Mira, Josefa Antón, Francisco Rodriguez-Valera
Published 2012-01-01

RaFAH: Host prediction for viruses of Bacteria and Archaea based on protein content

by Felipe Hernandes Coutinho, Asier Zaragoza-Solas, Mario López-Pérez, Jakub Barylski, Andrzej Zielezinski, Bas E. Dutilh, Robert Edwards, Francisco Rodriguez-Valera
Published 2021-07-01