Intestinal microbiota domination under extreme selective pressures characterized by metagenomic read cloud sequencing and assembly

by Joyce B. Kang, Benjamin A. Siranosian, Eli L. Moss, Niaz Banaei, Tessa M. Andermann, Ami S. Bhatt
Published 2019-12-01

Long-term taxonomic and functional divergence from donor bacterial strains following fecal microbiota transplantation in immunocompromised patients.

by Eli L Moss, Shannon B Falconer, Ekaterina Tkachenko, Mingjie Wang, Hannah Systrom, Jasmin Mahabamunuge, David A Relman, Elizabeth L Hohmann, Ami S Bhatt
Published 2017-01-01

Strain-resolved microbiome sequencing reveals mobile elements that drive bacterial competition on a clinical timescale

by Soumaya Zlitni, Alex Bishara, Eli L. Moss, Ekaterina Tkachenko, Joyce B. Kang, Rebecca N. Culver, Tessa M. Andermann, Ziming Weng, Christina Wood, Christine Handy, Hanlee P. Ji, Serafim Batzoglou, Ami S. Bhatt
Published 2020-05-01