driveR: a novel method for prioritizing cancer driver genes using somatic genomics data

by Ege Ülgen, O. Uğur Sezerman
Published 2021-05-01

CogNet: classification of gene expression data based on ranked active-subnetwork-oriented KEGG pathway enrichment analysis

by Malik Yousef, Ege Ülgen, Osman Uğur Sezerman
Published 2021-02-01

pathfindR: An R Package for Comprehensive Identification of Enriched Pathways in Omics Data Through Active Subnetworks

by Ege Ulgen, Ozan Ozisik, Osman Ugur Sezerman
Published 2019-09-01

Investigation of multiple sclerosis-related pathways through the integration of genomic and proteomic data

by Elif Everest, Ege Ülgen, Ugur Uygunoglu, Melih Tutuncu, Sabahattin Saip, Osman Uğur Sezerman, Aksel Siva, Eda Tahir Turanli
Published 2021-09-01

Sequential filtering for clinically relevant variants as a method for clinical interpretation of whole exome sequencing findings in glioma

by Ege Ülgen, Özge Can, Kaya Bilguvar, Cemaliye Akyerli Boylu, Şirin Kılıçturgay Yüksel, Ayça Erşen Danyeli, O. Uğur Sezerman, M. Cengiz Yakıcıer, M. Necmettin Pamir, Koray Özduman
Published 2021-02-01

Mutations and Copy Number Alterations in <i>IDH</i> Wild-Type Glioblastomas Are Shaped by Different Oncogenic Mechanisms

by Ege Ülgen, Sıla Karacan, Umut Gerlevik, Özge Can, Kaya Bilguvar, Yavuz Oktay, Cemaliye B. Akyerli, Şirin K. Yüksel, Ayça E. Danyeli, Tarık Tihan, O. Uğur Sezerman, M. Cengiz Yakıcıer, M. Necmettin Pamir, Koray Özduman
Published 2020-12-01